LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi02g2568	ATGAGAGATACACAAAATGCTATCTCCAACACCTTTCTGTTAATCTTCTTCTTCCAACTCCTTTACACCGCCGCCGTCACTTCCTACACTCCGGTTGAGCATTTCGCGGTCAACTGTGGTAACTCCGGCAACGTTCCGTCCAACGATCAACGGAACTGGGAAGGAGATAACGGCTCCACTTCATTCTTTCTCATCGATCCCGACGAAGAAACCCGACCCATCAAACCCGAATCACAAGTCGGATCCAATCTACCAACCCCTTATGATACTGCACGCGCATCTCGCTCTGAATTCTTCTATACATTTCCTGTCACCGACGGCCAAAAGTTTATTCGCCTCTACTTTTATCCATCTTCTTACAACCCAAACTTTCTTCGCTATGATGCTTTCTTCTCCGTCAAAGCTGGGCTCCACACCCTCCTTAGGAACTTCAACGCTTCACTTAACGCTGACGCTGGAATTTCATTCAACTTTGCTGAACCTGAAGGAGCCATTGTACGAGAGTACATCGTCAACGTTGACCCAGGTGAGGGGCTTAGCATAATCTTCACGCCCAACCCATCTCATCCAAACGCCTATGCTTTTGTGAATGGGATTGAGGTTGTCTCTATGCCTTCCTTTCTTTATTACACAAACCCAGACAATCTGGAGGGGATGATGCTTGAAGGTGGAAACCTACAGTTTCCGGTCAAGAACAATAGTGCTCTTGAGGCTTTGTACAGAATTAACGTTGGCGGAAGCAGTATCCCTTCCTATGAAGACACAGGTATGTTTCGTTTCTGGGATCAGGATAATGACTACTTAGAGAGCGGGGAGCGCCCATATAGTGTATCAGCAGGTTTTGGTTTGAACCTAACCTACATAGATGATCAAAATTATTTTGCTCCTGATGAGTTATACAAGACTGCTCGAAACTACGGGATGAATGAAAAATCCAAGTTTAACGTGACCTGGGAATTTGAAGTTGACTCAGAATTTGCTTATATGGTAAGGTTGCATTTTTGTGAGTTTGACCTACACATTCAAAAAGTTGGAGAAAGAGTCTTTCAGATCTTCATAAATGATGCTTTGGCAGAGTCTCTCGCCGATGTCATGATTTGGACCCAAGAAACATTGGTTCCTGTGCACAGGGACTATGCCATATCGATGCAAGGCAATGGAAGCTTGAAGAGGCGAAATCTTTCAATTAGGTTGCATCCACATCCAACTGCAAGAAGCACTTACAGAGATGTTTTATTGAATGGCATTGAAATTCTTAAAATAAGTGACTTCAGAAAGAATCTCGGAGGTTCCAATCCTGATCCACATGTTTTTCCTTCAGTACCGCCTTGGAAGGCACCCAAAAAGAACCCACCAAAAATGGGAGCAATTTCCATAGCAGTAGGGTCTACTTCCGGCTTTATTCTGCTATCTCTCATCGTTTTGCTGACTTATTGTTGGTTGTCTAGAAATACAATCACCGAAGGAAATTCACAGTGGGAACCACAACCAATATCGACGTCAAAAACAAACAAATCCTCACTATTACTCTCAGATTTGTGCCGGAGCTTTTCAATAGGGGAGGTAAAAGATGCAACTAATAATTTTGATGATGGTTTAATCATAGGTGTTGGAGGGTTTGGTAACGTCTATAAAGGTAAAATTGACAACGGTTCAGTTTTAGTGGCAATCAAACGTCTCAAACAAGGTTCACAACAAGGGCTCAAGGAGTTCCAAACTGAGATCGAAATGCTAGCTCAACTTCGCCACCATCATTTGGTATCTCTAGTTGGTTATTGCAACGATGACAACGAGATGATACTTATCTATGAGTTCATGGCTCGTGGGACCTTTCGTGAGCATCTGTATGATACTGAAAATCAACCAATTTCTTGGAAGCAAAGGTTGGAGATTTGCCTAGGTGCTGCCCGAGGACTGCATTACCTACATACAGGAGCAAAGCATGCAATTATTCATCGCGATGTCAAGTCAACAAACATTTTAATAGATGAAAATTGGATGGCCAAGATTTCAGATTTCGGCCTATCCAAAATAGGACCTGCAGGTATTTCGAGATCTAACATTAGTATAAGCACATTAGTGAAAGGAAGTATTGGATATTTGGATCCAGAATACTATACATTACAAATATTGACTGATAAGTCAGACGTGTACTCATTTGGAGTTGTCTTGCTGGAGGTATTATGTGGAAGGCCTCCTATTCTCCGTGGGGTGGAGAAGGAGCGTCAAAACCTTGTAGAGTGGTTTCGAAGAAGTATTGATGAGAATCAGATGTATGAGACAGTGGATCCAATCTTGAGGGAAAGTATCACTCCAGTGTGCTTGAAAGGATACACTGAGATTGCATTGAAATGCTTGGCTAATAATGGGAATGAACGGCCATCCATGGGTGATGTGATGTTAGTCCTTGAATCTTTGGTGGAGATGCTGAACAAAGACGAGAAGACAAAGCTTGGTGGGACTCTAGATGAGGAGATTACTGTTGAACAAGGATAA	2496	0.4271	MRDTQNAISNTFLLIFFFQLLYTAAVTSYTPVEHFAVNCGNSGNVPSNDQRNWEGDNGSTSFFLIDPDEETRPIKPESQVGSNLPTPYDTARASRSEFFYTFPVTDGQKFIRLYFYPSSYNPNFLRYDAFFSVKAGLHTLLRNFNASLNADAGISFNFAEPEGAIVREYIVNVDPGEGLSIIFTPNPSHPNAYAFVNGIEVVSMPSFLYYTNPDNLEGMMLEGGNLQFPVKNNSALEALYRINVGGSSIPSYEDTGMFRFWDQDNDYLESGERPYSVSAGFGLNLTYIDDQNYFAPDELYKTARNYGMNEKSKFNVTWEFEVDSEFAYMVRLHFCEFDLHIQKVGERVFQIFINDALAESLADVMIWTQETLVPVHRDYAISMQGNGSLKRRNLSIRLHPHPTARSTYRDVLLNGIEILKISDFRKNLGGSNPDPHVFPSVPPWKAPKKNPPKMGAISIAVGSTSGFILLSLIVLLTYCWLSRNTITEGNSQWEPQPISTSKTNKSSLLLSDLCRSFSIGEVKDATNNFDDGLIIGVGGFGNVYKGKIDNGSVLVAIKRLKQGSQQGLKEFQTEIEMLAQLRHHHLVSLVGYCNDDNEMILIYEFMARGTFREHLYDTENQPISWKQRLEICLGAARGLHYLHTGAKHAIIHRDVKSTNILIDENWMAKISDFGLSKIGPAGISRSNISISTLVKGSIGYLDPEYYTLQILTDKSDVYSFGVVLLEVLCGRPPILRGVEKERQNLVEWFRRSIDENQMYETVDPILRESITPVCLKGYTEIALKCLANNGNERPSMGDVMLVLESLVEMLNKDEKTKLGGTLDEEITVEQG	831

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi02g2568	831	Gene3D	Transferase(Phosphotransferase) domain 1	606	824	-	-
	Mibi02g2568	831	Pfam	Protein tyrosine and serine/threonine kinase	535	800	IPR001245	GO:0004672\|GO:0006468
	Mibi02g2568	831	PANTHER	OS03G0124300 PROTEIN-RELATED	12	488	-	-
	Mibi02g2568	831	FunFam	Receptor-like protein kinase FERONIA	606	824	-	-
	Mibi02g2568	831	SUPERFAMILY	Protein kinase-like (PK-like)	514	805	IPR011009	-
	Mibi02g2568	831	SMART	serkin_6	529	807	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi02g2568	831	ProSiteProfiles	Protein kinase domain profile.	529	807	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi02g2568	831	FunFam	Receptor-like protein kinase FERONIA	500	605	-	-
	Mibi02g2568	831	Pfam	Malectin-like domain	37	420	IPR024788	-
	Mibi02g2568	831	ProSitePatterns	Protein kinases ATP-binding region signature.	535	558	IPR017441	GO:0005524
	Mibi02g2568	831	Gene3D	-	34	205	-	-
	Mibi02g2568	831	Gene3D	-	235	422	-	-
	Mibi02g2568	831	FunFam	FERONIA receptor-like kinase	34	205	-	-
	Mibi02g2568	831	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	650	662	IPR008271	GO:0004672\|GO:0006468
	Mibi02g2568	831	FunFam	FERONIA receptor-like kinase	234	422	-	-
	Mibi02g2568	831	Gene3D	Phosphorylase Kinase; domain 1	491	605	-	-
	Mibi02g2568	831	CDD	STKc_IRAK	535	812	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi02g2568	Mibi-ChrMibi02	32471984	32474479	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi02g2568	25	831	Receptor kinase-like Gene Family	AT3G51550	44.418	0.0	655

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Mibi02g2568		Malectin_like	3.6e-38	CL0202