Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2562 ATGGTCATATCTTTCCTCTTACTCTTCCTTCTCATTTCTTGTGTCACCTCATACACTCCTGTTGATAACTTCTTAGTCAACTGCGGCGGCTCCGGCAATTTTCCTCCTCCTTTAGGTGGCCGGAACTGGACCGGCGACATAGACTCCGGTCGATACTTTCCGATAGATTTCTCCAACACTAACAACTCATCAATAAGCGCTAAGGCACTTGGCAAAACAGTCCCTTACGACACCGCACGCGTCTCTCGCTCTGAATTCTACTACTTGCTTCCTTTGAAGACCAAAGGCCAAAAGTTTATACGCCTTTATTTTTACCCATATTCTTACAATCCCGATTTCCTTCGCTCTGATTCTTTATTTTCCGTCAGAGTTGGATCTCACATTCTTTTGAAAGACTTCAATGCTTCAATCACCGCTGATGATGCTGATGAAGAAACCATTTTACGAGAGTACTGCGTCAATGTTTTTGACCCCGATGAGGGGCTATTCATAACCTTCATGCCAAGCCCATCTCATCCAAATGCCTATGCTTTTGTTAATGGGATTGAGGTTGTCTCTATGCCTTCCTTTGTTTACTACACCAAACCTGATGACTTTCAGTCTATGCTGCTAAATGGTGGAACCCAACAGTATCCGGTGAAAAATTATAGAGCTCTCGAGACTGTGTACAGAATCAATGTTGGTGGGAGTCAGATCCCTTCCGAAGGAGATACTGGCATGTTTCGGAGTTGGGACCAGGATAATGACTACTTGGAGAGCTGGGAGCCCAATTATAGTGTATCATCTGGTTTTGGTTTGAAGCTAATTTACAAAGATGGTCAAAATTATTTTGCACCTGATGATGTATACAAGACTGCTCGAAACTACGGGATGAATGAAAAATCCAAGTTTAACGTGACCTGGGAATTTGAGGTGGATTCAGCGTTTTATTATATGGTGAGATTGCATTTTTGTGAGTTTGATGAACATATTGAAAAAGTTGGCGTAAGAGTTTTCCAAATCTTCATAAATGATGTTTTGGTTGAGCCTGTCGCCGATGTGATGTTGTGGACACAGACACTAGTTCCTGTCCATAGGGACTATGCAGTGTGGTTGCCGAACGATGGAAGCTCAAAGAAGCTGAATCTTTCAATTATGTTGCGACCACACCCAACTGCAAGAAGCACTTACAGAGATGTGTTATTGAATGGCATTGAAATTCTCAAAATAAGTGACTTCAGAAACAATCTCGGAGGTTCCAATCCTGATCCACTTGTTTTTCCTTCAATACCGCCTTCAAAGGCACCCAATAAAACGAGAGTAATTTCCGTAGTAGTGGGGTCAGTTTCTTGCCTCATTCTGCTATCTCTCATCGTTTTGCTGACTTATTGTCGATTGGCTAAAGCAGCAATTAACGTAGGATGTTCACAGTGGGGACGAAAACCAGAATCGACATCTAAAGCAAACATATCCTTAGTGTTACAATCTGATTTGTGTAGGTGCTTTTCAATAAGCGAGGTAAAAGCAGCCACAAATAATTTTGATGATAGTTCAATTATAGGTGTTGGAGGGTTTGGCAATGTCTATAAAGGCTACATCGACAATGGTTCAGTTACTGTGGCAATCAAACGGCTCAAACAAGGTTCACAACAAGGTCTCAAAGAGTTCCAAACTGAGATTGAAATGCTCTCCCAACTTCGCCACAATCATTTGGTGTCTTTGGTTGGTTACTGCAACGAGGACAATGAGATGATCCTTGTCTACGAGTTCATGGCTTGTGGGACCTTTTGTGAGCATCTTTACAATTGTGACAGCCCACTTTCTTGGAAGCAAAGGTTGGAGATTTCCCTTGGTGCTGCACGAGGACTGCATTATCTACATACAGGAGCAAAGCATGCAATCATTCATCGCGATGTCAAGTCGATAAACATCTTAATTGATGAAAATTGGATGGCCAAGATTTCTGATTTTGGGCTATCCAAGATTGGACCTGCTGGTATTTCGAGATCAAACATCAACATAAGCACATTAGTGAAAGGAAGCATTGGATATTTGGATCCAGAATACTACACTCTACAAGTATTGACCGATAAGTCAGACGTGTACTCATTTGGAATTGTGTTGCTAGAGGTCTTATGTGGAAGGCCTCCTATTCTCCGTGCTGTGGAGAGGGAGCAAAAAAACCTCGTAGAGTGGTTTCGAAGATGTGCTGATGAGGACAAGATTTATGACACAATTGATCCATTCATCAGGGAAAGTATATCAACAGAGTGCTTAGACGCATACATTGAGATTGCATTGAAATGCTTAGCAAATAATGGCAATGAACGGCCAGCCATGGGTGATGTGATGTTGGGCCTTGAATCCTTGGTGGAGATGCTGTACAAAGAAGAGAGGACAAAGCTGAGTGGGACTGTAAATGAGGAGATTATTGCTGAGGACTTCTAA 2427 0.4219 MVISFLLLFLLISCVTSYTPVDNFLVNCGGSGNFPPPLGGRNWTGDIDSGRYFPIDFSNTNNSSISAKALGKTVPYDTARVSRSEFYYLLPLKTKGQKFIRLYFYPYSYNPDFLRSDSLFSVRVGSHILLKDFNASITADDADEETILREYCVNVFDPDEGLFITFMPSPSHPNAYAFVNGIEVVSMPSFVYYTKPDDFQSMLLNGGTQQYPVKNYRALETVYRINVGGSQIPSEGDTGMFRSWDQDNDYLESWEPNYSVSSGFGLKLIYKDGQNYFAPDDVYKTARNYGMNEKSKFNVTWEFEVDSAFYYMVRLHFCEFDEHIEKVGVRVFQIFINDVLVEPVADVMLWTQTLVPVHRDYAVWLPNDGSSKKLNLSIMLRPHPTARSTYRDVLLNGIEILKISDFRNNLGGSNPDPLVFPSIPPSKAPNKTRVISVVVGSVSCLILLSLIVLLTYCRLAKAAINVGCSQWGRKPESTSKANISLVLQSDLCRCFSISEVKAATNNFDDSSIIGVGGFGNVYKGYIDNGSVTVAIKRLKQGSQQGLKEFQTEIEMLSQLRHNHLVSLVGYCNEDNEMILVYEFMACGTFCEHLYNCDSPLSWKQRLEISLGAARGLHYLHTGAKHAIIHRDVKSINILIDENWMAKISDFGLSKIGPAGISRSNINISTLVKGSIGYLDPEYYTLQVLTDKSDVYSFGIVLLEVLCGRPPILRAVEREQKNLVEWFRRCADEDKIYDTIDPFIRESISTECLDAYIEIALKCLANNGNERPAMGDVMLGLESLVEMLYKEERTKLSGTVNEEIIAEDF 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2562 808 Pfam Protein tyrosine and serine/threonine kinase 512 777 IPR001245 GO:0004672|GO:0006468
Mibi02g2562 808 Gene3D Transferase(Phosphotransferase) domain 1 584 802 - -
Mibi02g2562 808 Pfam Malectin-like domain 27 402 IPR024788 -
Mibi02g2562 808 ProSitePatterns Protein kinases ATP-binding region signature. 513 536 IPR017441 GO:0005524
Mibi02g2562 808 FunFam Receptor-like protein kinase FERONIA 478 583 - -
Mibi02g2562 808 PANTHER OS03G0124300 PROTEIN-RELATED 4 463 - -
Mibi02g2562 808 SUPERFAMILY Protein kinase-like (PK-like) 483 778 IPR011009 -
Mibi02g2562 808 FunFam FERONIA receptor-like kinase 23 188 - -
Mibi02g2562 808 SMART serkin_6 507 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2562 808 Gene3D - 217 404 - -
Mibi02g2562 808 Gene3D - 23 188 - -
Mibi02g2562 808 FunFam FERONIA receptor-like kinase 217 404 - -
Mibi02g2562 808 FunFam Receptor-like protein kinase FERONIA 584 802 - -
Mibi02g2562 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Mibi02g2562 808 Gene3D Phosphorylase Kinase; domain 1 467 583 - -
Mibi02g2562 808 ProSiteProfiles Protein kinase domain profile. 507 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2562 808 CDD STKc_IRAK 513 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2562 Mibi-ChrMibi02 32338816 32341242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2562 11 792 Receptor kinase-like Gene Family AT3G51550 43.712 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi02g2562 Malectin_like 6e-31 CL0202