Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2554 ATGTGCCACGTGGCCTCCCATGCGCCATTGCTTTACCTTTCAGTGCGGCGTGGTCGGAAAGATGAGAGACATAAGATGAGCAACACAAATAGAACTTCATCATCAAAAGAAGCAGATTTCTCATTAAAACAGGAAAATCATCATGACAAAACGAAGAAGGCTTCAACTTCATCATCATCAACAACAACAACAAGAAGCAATAGCTTAGCAGCACAATGGCTAAGATCAAAGGATCCAAGGATTGTTCGTGTTTCGCGAGTCTTCGGAGGCAAAGATCGACACAGCAAAGTTTGCACAGTGAAAGGACTAAGAGATAGACGAGTGAGACTCTCAGTATCCACAGCTATTCAACTATATGGTCTTCAAGATAGGTTAGGGTTCAACCAACCCAGTAAAGTTGTGGATTGGTTGCTTGATGCAGCCAAGCATGAAATTGATGAACTCCCACCACTTCAAATTCCACCTGAAAGCTTCAGTAATTTCTGCCATCATCAACCTTGTCTGAACAATAATGAAGTTGTAAGTACTTCTCAGCAAAATGAACAAGGGTTTAACATCAATGATGAGAGTCTTCATCATCACTTGGAAGGTTCAAACTCAATCATGTCCAAGTCTAAAGGAGAAGAAATGGCTATTCATGATGAAAAAGCAAATTGGAATAGGAGGGAAGAAGAAGAAGAAGAAGAGGATCATAGAGACGATGTGTTAACAAGAGGAAATAACAGTCATCATCAAAATCACCCTTCTTTTTTGGGTTTGTTGAACACTATGCCATTTGGTTATAATGTTAATAATAACCAATGGGAGGCTAATTCATCATCAAGCAATGTTTCTCACCACTCAGGAAACAGCCTTGGACTTGCAAATATTGCTAACGCTGTACCTTTCTCATCAGCGTTGTCATCAACCTTATCTTTATCAACTGGACCAATTATGGCTCATCATCATCATCAGCCATATTTTCCTTCAAATTTTGGGGCAATAATGGACATGGATCATCCAAGTACGCAGATGAATCATCATCAGTATCAGATGTTGTTGAGTTCATCAAATTCTCTGACGAGTTCTTCTGTTGTTCATAATGACACTTCAAGCCAACTACAACCTACGAAGCCATTCAGCTTGACTATGATGATGGCAACTCCTAAACTTCTCGGATCACCACCGATGGATAAAGACCAGGTTTTTCCTTCCAAGTGA 1200 0.4017 MCHVASHAPLLYLSVRRGRKDERHKMSNTNRTSSSKEADFSLKQENHHDKTKKASTSSSSTTTTRSNSLAAQWLRSKDPRIVRVSRVFGGKDRHSKVCTVKGLRDRRVRLSVSTAIQLYGLQDRLGFNQPSKVVDWLLDAAKHEIDELPPLQIPPESFSNFCHHQPCLNNNEVVSTSQQNEQGFNINDESLHHHLEGSNSIMSKSKGEEMAIHDEKANWNRREEEEEEEDHRDDVLTRGNNSHHQNHPSFLGLLNTMPFGYNVNNNQWEANSSSSNVSHHSGNSLGLANIANAVPFSSALSSTLSLSTGPIMAHHHHQPYFPSNFGAIMDMDHPSTQMNHHQYQMLLSSSNSLTSSSVVHNDTSSQLQPTKPFSLTMMMATPKLLGSPPMDKDQVFPSK 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2554 399 MobiDBLite consensus disorder prediction 216 244 - -
Mibi02g2554 399 MobiDBLite consensus disorder prediction 15 70 - -
Mibi02g2554 399 Pfam TCP family transcription factor 90 230 IPR017887 -
Mibi02g2554 399 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 35 346 IPR005333 GO:0003700
Mibi02g2554 399 MobiDBLite consensus disorder prediction 15 30 - -
Mibi02g2554 399 MobiDBLite consensus disorder prediction 55 70 - -
Mibi02g2554 399 ProSiteProfiles TCP domain profile. 90 148 IPR017887 -
Mibi02g2554 399 MobiDBLite consensus disorder prediction 38 54 - -
Mibi02g2554 399 MobiDBLite consensus disorder prediction 216 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2554 Mibi-ChrMibi02 32171756 32173893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2554 73 187 TCP Transcription Factor Family AT3G02150 71.304 1.91e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mibi02g2554 TCP 3.6e-32 No_clan