Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2518 ATGATCATGATGAGGACAATCATCACTCTCTCACACAATATTCTCTTCTTCTTCCTTCTATCACCAGCCGTCGATGCCGAATTAAACCAGCAACAACGCCTAAATTCTTATCCTAAATTATCACGAATCCTTAAATTGGACCCATCATTCACTCCCGTAGTCGCCGCCATCGGCTGCTCCATCTTTTTCATCATCTTCTTCTCCATCTATGTCCGATACTGCTCCGTCCCCCGACACCCGACCGCCACGGCCGCCGCCACCAACGTCCATTGTTCTTCCTCTACTCATGAAGGCATAGACCCGAGATTACTCGAAACCTTCCCTACTTTTGTCTACTCCAGCATCAAACACCTCAAGCATGATGATAATTCAGTGTTGGAATGTGCCGTGTGCTTGAGCGAGTTTGATCACCAGGACTCGCTACGTTTGCTTCCTATATGTAATCATGTGTTTCATCCTCAATGCATTGATGCGTGGTTAGGCTCCCACGTGACTTGTCCCGTTTGTAGGACCAGGCTTACGCCGGAGCACCGGGATGGCGAGGTTGTGATAGTAATTCCGGATGATGAGGTGAATGTGGAAGATGAGTTAGATGAAAGTTCTGCGAGTAGAATCAGAGAAGAGTTTGATTTAGGTGAAAGAGGAAGAAGTTGTTTGGGGAGGTGTCATTCTACGGGTCATTCTATGAGTTTGGTTGGAACAGTAGGGAAGGACATGGAGAGGTATACTCTGAGGTTAACGGAGGATGTGAGGAAGCTAATTCTGGCGAATCATGGAGGAATGCGGCGGTCATCGAGCTACGATGTCTTTGGATCGGCGGGAAGACGGCCAGGTGAAGTTAAATGTCAAAAATTTTAA 858 0.472 MIMMRTIITLSHNILFFFLLSPAVDAELNQQQRLNSYPKLSRILKLDPSFTPVVAAIGCSIFFIIFFSIYVRYCSVPRHPTATAAATNVHCSSSTHEGIDPRLLETFPTFVYSSIKHLKHDDNSVLECAVCLSEFDHQDSLRLLPICNHVFHPQCIDAWLGSHVTCPVCRTRLTPEHRDGEVVIVIPDDEVNVEDELDESSASRIREEFDLGERGRSCLGRCHSTGHSMSLVGTVGKDMERYTLRLTEDVRKLILANHGGMRRSSSYDVFGSAGRRPGEVKCQKF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2518 285 CDD RING-H2_PA-TM-RING 127 170 - -
Mibi02g2518 285 PANTHER RING FINGER DOMAIN-CONTAINING 45 173 - -
Mibi02g2518 285 SMART ring_2 128 169 IPR001841 -
Mibi02g2518 285 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 181 IPR013083 -
Mibi02g2518 285 SUPERFAMILY RING/U-box 104 176 - -
Mibi02g2518 285 ProSiteProfiles Zinc finger RING-type profile. 128 170 IPR001841 -
Mibi02g2518 285 Pfam Ring finger domain 127 170 IPR001841 -
Mibi02g2518 285 FunFam E3 ubiquitin-protein ligase ATL6 87 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2518 Mibi-ChrMibi02 31271403 31272260 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2518 14 276 Rapid Response to Elicitors AT3G05200 37.809 1.75e-45 156