Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2516 ATGATGAGAATCATGATATCCAGCTTCCTCTTCATCTTGCTGGTATGGACAGTAGATGCTCAACTGGTAGCTTCCCAAACAACACCTTATTTTCCTTCACTACGCAACTATGACCCTTCATACGCACCCGTAATTGTTGCCCTTGGTTGCTCCTTCTTGTTCGTCCTCTTCTTCGCCATCTTCCTCCGCCACTGCTCCGAACCCGACATCTCCGTCACCGACCTACCCGCCGCCACCACAGCCACCATCATCAATTACACTCCTCACCATCATGAAGAACCTCAAGGTATTGACCCAAAATTACTTGACTCCTTCCCTATCATCATGTATTGCAACCTCAAAGACATCAAACTTGATGGGATTTCAAGTGTGAGTGTCCCACTAGAGTGTGCCGTGTGCTTGACCGAGTTCAACTACGACGACAAGCTTCGGTTACTTCCGAAATGTAAGCATGTCTTTCATCCTGATTGCATCAAGGAGTGGTTAGCTTCTCATGTGACTTGTCCGGTTTGCCGGGGGGTGTTGAAGCCGGTGGCGGAGGAGGACGTGGCGGTGGTGGTGGTGGTTCGGAATGAGGCGAATGAGACGCCGGAGGAGGTGAGGACGATGAGGGAGGTGAGTTGTGGAGAGAGAGGGTTGAGGAGGTGTCATTCAACGGGACATTCTTTGGATTTGAGGTTGAGGGAGGATTTAAGGAAGGAGAGTATGGGTTGGAGTGCTTCCATGAAATACGGTAACGATGGTGTGATTGAAGGACGTGAAGATGAAGGAAGTAGTGGAGGACGCTTGCTTCCGGTAATGTCTCTGCATCTTCCTCCTCTAGTCCTCTTCAATTTCTCCTACCACGAACCAGTTTTCCTACCCTTCAAAAGATGA 876 0.4954 MMRIMISSFLFILLVWTVDAQLVASQTTPYFPSLRNYDPSYAPVIVALGCSFLFVLFFAIFLRHCSEPDISVTDLPAATTATIINYTPHHHEEPQGIDPKLLDSFPIIMYCNLKDIKLDGISSVSVPLECAVCLTEFNYDDKLRLLPKCKHVFHPDCIKEWLASHVTCPVCRGVLKPVAEEDVAVVVVVRNEANETPEEVRTMREVSCGERGLRRCHSTGHSLDLRLREDLRKESMGWSASMKYGNDGVIEGREDEGSSGGRLLPVMSLHLPPLVLFNFSYHEPVFLPFKR 291
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2516 291 PANTHER RING FINGER DOMAIN-CONTAINING 38 175 - -
Mibi02g2516 291 FunFam E3 ubiquitin-protein ligase ATL6 85 178 - -
Mibi02g2516 291 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 175 IPR013083 -
Mibi02g2516 291 Pfam Ring finger domain 129 172 IPR001841 -
Mibi02g2516 291 SMART ring_2 130 171 IPR001841 -
Mibi02g2516 291 SUPERFAMILY RING/U-box 129 178 - -
Mibi02g2516 291 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi02g2516 Mibi-ChrMibi02 31255650 31256525 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2516 9 236 Rapid Response to Elicitors AT3G05200 35.075 1.58e-35 130