Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2514 ATGAAGTTTGATCAACAAGATATTCTCCGATTGCTTCCGAAATGTAACCACTTGTTTCACACTCAATGCATCGATGCTTGGTTGGCCTCTCACGTGACTTGCCCTGTATGTCGCACGTGCCTGAATGCTGTGGAGGAGCGCGGCAGTGAAGTCGTGATAGTGATTACGGATGAGGTAAATTCTCAACGGATGGTTGATGAAAGTTATGAGAGTAGAACGGAGGGTAATTCAGGAAATGTAATAAGGAGTTTGGGGAGGTGTCATTCAACGGGTCACTCTATGGGATTTAGTGAAATTGGTGGGAAGGACATGGAGAAGTACAGTGTTAGGAATTTGGAGGATGTAATGAAACAGATTAAGAGTAGTCACGGCGGAATGCGGCGGTCGGCGAGCTCCGATGTGCTCCATGGACGGTCGCCGGGTGAACAGAAAAGCAGAGATGTACTTTACATTACGACGAAGAACTGGGAATTGTGA 477 0.4675 MKFDQQDILRLLPKCNHLFHTQCIDAWLASHVTCPVCRTCLNAVEERGSEVVIVITDEVNSQRMVDESYESRTEGNSGNVIRSLGRCHSTGHSMGFSEIGGKDMEKYSVRNLEDVMKQIKSSHGGMRRSASSDVLHGRSPGEQKSRDVLYITTKNWEL 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2514 158 Pfam Ring finger domain 3 38 IPR001841 -
Mibi02g2514 158 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 41 IPR013083 -
Mibi02g2514 158 MobiDBLite consensus disorder prediction 120 143 - -
Mibi02g2514 158 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 2 93 - -
Mibi02g2514 158 SUPERFAMILY RING/U-box 4 43 - -
Mibi02g2514 158 ProSiteProfiles Zinc finger RING-type profile. 15 38 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2514 Mibi-ChrMibi02 31214297 31217779 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2514 2 119 Rapid Response to Elicitors AT3G05200 39.416 2.80e-21 87.0