Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2512 ATGCTAAATATCTATTTCACTGTGAGTTCTCAACAACATAATATCCAAATGATCAAGAGAATCACACCCTCACACATCATCCTCTTCTTCCTCCAATCCTTGGCCGTACATGCCCAGTCAAGTTCACCCCAAACCCGGGACGTATCATCCGACCATATGCTATTGGCCCTCGTTTGCATCATCTTATTCGTCGCCATCTTCTCCATCTTCCTCCGCCATTGCTCCAATACCGACACTCGCAACGGCTCCACCATTAATTGTCCATCAAGTAGTCATCAAGGCATTGATCCAAAATTCCTCAACACCTTCCCTATCCTCATTTACTCCGCAGTGAAATTCGAGGTAGCTCCTAATGAATGTTCGGTATGCTTGAACGAGTTTGATCAACAAGATATTCTCCGATTGCTTCCCAAATGTAACCACTTGTTTCACCCTCAATGCATTGATGCTTGGTTGGCCTCCCACGTGACTTGCCCTGTATGTCGCACGTGCCTGTTACCCTGGGAGGTAGGCGACGGTGAAGTAGTCATAGTGATTACGGATGAGGTGAATTCTCAACGGATGGTTGATGTAAGTTATGAGAGTAGAACGGAGGAGAATTCAGGAGATGTTATAAGGAGTTTGGGGAGGTGTCATTCAACGGGTCACTCTATGGGTTTTGGTGAAATTGGTGGGAAGGACATGGAGAAGTACAGTGTTAGGAATTTGGAGGATGTGAAGAAACAGATTAAGAATAGTCACGGCGGATTGCGGCGGTCGGCGAGCTCCGATGTGCTCCATGGACGGTGGCCGGGTGAACAGAAAAGTAGAGATGTACGTTACATTACGACGAAGAACTGGGAATTGTGA 849 0.4664 MLNIYFTVSSQQHNIQMIKRITPSHIILFFLQSLAVHAQSSSPQTRDVSSDHMLLALVCIILFVAIFSIFLRHCSNTDTRNGSTINCPSSSHQGIDPKFLNTFPILIYSAVKFEVAPNECSVCLNEFDQQDILRLLPKCNHLFHPQCIDAWLASHVTCPVCRTCLLPWEVGDGEVVIVITDEVNSQRMVDVSYESRTEENSGDVIRSLGRCHSTGHSMGFGEIGGKDMEKYSVRNLEDVKKQIKNSHGGLRRSASSDVLHGRWPGEQKSRDVRYITTKNWEL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2512 282 FunFam E3 ubiquitin-protein ligase ATL6 84 167 - -
Mibi02g2512 282 MobiDBLite consensus disorder prediction 243 264 - -
Mibi02g2512 282 Pfam Ring finger domain 118 162 IPR001841 -
Mibi02g2512 282 ProSiteProfiles Zinc finger RING-type profile. 120 162 IPR001841 -
Mibi02g2512 282 SUPERFAMILY RING/U-box 114 168 - -
Mibi02g2512 282 CDD RING-H2_PA-TM-RING 119 162 - -
Mibi02g2512 282 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 166 IPR013083 -
Mibi02g2512 282 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 43 238 - -
Mibi02g2512 282 SMART ring_2 120 161 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2512 Mibi-ChrMibi02 31202680 31203528 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2512 26 243 Rapid Response to Elicitors AT3G05200 32.210 2.83e-36 132