Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2509 ATGATCCACATAATAATCACACCCTCACACATCCTCGCCTTCTTCTTCCTTCTATCATCAACCGTAGATGCCCAACCAAGTTTGCCACCAGCGGTATCTCCAAATACTCCACCCTATACCTGGGACTTATCATTCTCTCCTGTGATCATGGCCCTCATTTGCTCTTTCTTCTTTGTGGGTAGCTTTGTCATCTACATCCGCCACTGCTCCGACCTGGACCTCCCTATGGCCGAAGATCCAACGGGCGTGACTAACAATTGTTGTTCAAATAATTGTCCTCAAGGTATCGACCCAAAATTACTTAACACTTTTCCCATCCTCATATATTCCGCCATCGAACAACTCAAATCTGGGAACACCACCATGCGGGAGTGTGCCGTGTGCTTAGGCGAGTTTGAGGACCTTGATGAGCTCCGATTGCTCCCAAAATGTGACCATATGTTTCACACTCAATGCATAGATGCTTGGTTGGCTTCCAACTTGACTTGCCCAGTTTGTCGTTCAGGGCCGAAGCCAGTGAAGGAGCACCGTGGAGGTGAAAACGACGTGGTGATTGTATTTCCGATGAATTGA 573 0.4764 MIHIIITPSHILAFFFLLSSTVDAQPSLPPAVSPNTPPYTWDLSFSPVIMALICSFFFVGSFVIYIRHCSDLDLPMAEDPTGVTNNCCSNNCPQGIDPKLLNTFPILIYSAIEQLKSGNTTMRECAVCLGEFEDLDELRLLPKCDHMFHTQCIDAWLASNLTCPVCRSGPKPVKEHRGGENDVVIVFPMN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2509 190 ProSiteProfiles Zinc finger RING-type profile. 125 167 IPR001841 -
Mibi02g2509 190 SMART ring_2 125 166 IPR001841 -
Mibi02g2509 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 172 IPR013083 -
Mibi02g2509 190 SUPERFAMILY RING/U-box 103 173 - -
Mibi02g2509 190 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 29 169 - -
Mibi02g2509 190 Pfam Ring finger domain 124 167 IPR001841 -
Mibi02g2509 190 FunFam E3 ubiquitin-protein ligase ATL6 84 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2509 Mibi-ChrMibi02 31127482 31128054 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2509 12 168 Rapid Response to Elicitors AT3G05200 40.000 4.02e-36 128