Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2508 ATGATGAAGAGAATAACATTCTCACATATCACCATCTTCTTCCTTCTATCATCGGCCGTTGATGCCCAATCAAATTCACGGCCATCAGCTCCTCCAAGTGCTCCGCTTCCGACATGGGACGTATCATTCGCTCCCGTAATAGTCACCATCGTTTGCGCCTTCTTCTTCATCGGAGTCTTCGTCGTCTACCTTCACCACTGCTCCGACATAGAACTCGACGCCGGAAACCTTACCAGCGCCACAAACAATTGTTCTACAAGTCATCCTCAAGGCATAGACCCAAAATTACTCAACACCTTCCCCATAATCCTCTACTCCGCAGTGAAAAACCTACAATTTGGGAAATCCACCGCACCGGAATGTGCCGTGTGCTTGAGCGAATTCGACCACAACGATTCGATCCGATTGCTACCAAAATGTAATCATGTGTTTCACCCTCAATGCATTGATGCCTGGTTCGCATCCCACGTGACTTGCCCTGTTTGTCGTGGCAGGCAAGGTGATAATAATGAAGTCGTCATAGTAATCCCAAATGAGGTAAATTCTCAGCAGGTGTTGGGTGAGAGTACTGAGAACAGAAGGGTGATTCATTTAGGAGATAGGACAATTTTGGGAAGGTGTCATTCAACAGGTCACTCTTTGGATTTGGGTGGAATCAAAGGGAAGGAGACGGATGTGAGGGAACATATTCCAGTGACTCACGATGGAATGCGGCGGTCGGCGAGTTACGGCGTGTTCGGTGGATGGCCGGGTTATGAAGAGAGTAGTAGAGAGGATTTGATCGTTCCATTTGGTAATACGTCTTCTTTCTTCTAA 816 0.473 MMKRITFSHITIFFLLSSAVDAQSNSRPSAPPSAPLPTWDVSFAPVIVTIVCAFFFIGVFVVYLHHCSDIELDAGNLTSATNNCSTSHPQGIDPKLLNTFPIILYSAVKNLQFGKSTAPECAVCLSEFDHNDSIRLLPKCNHVFHPQCIDAWFASHVTCPVCRGRQGDNNEVVIVIPNEVNSQQVLGESTENRRVIHLGDRTILGRCHSTGHSLDLGGIKGKETDVREHIPVTHDGMRRSASYGVFGGWPGYEESSREDLIVPFGNTSSFF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2508 271 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Mibi02g2508 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 168 IPR013083 -
Mibi02g2508 271 FunFam E3 ubiquitin-protein ligase ATL6 80 169 - -
Mibi02g2508 271 SMART ring_2 121 162 IPR001841 -
Mibi02g2508 271 SUPERFAMILY RING/U-box 120 165 - -
Mibi02g2508 271 PANTHER RING FINGER DOMAIN-CONTAINING 27 164 - -
Mibi02g2508 271 CDD RING-H2_EL5_like 120 163 - -
Mibi02g2508 271 Pfam Ring finger domain 120 163 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2508 Mibi-ChrMibi02 31121196 31122011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2508 10 214 Rapid Response to Elicitors AT3G05200 37.131 4.29e-39 139