Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2506 ATGATCAACATAATCATCACACTCTCACACATTCTCGTCTTCTTGCTTCTCTCGTCCGCCGTCGTCGTAAACGGCCAGTCAAGTTCTCTGCCACCACCTCCGGCGGCGGCGGCTTCTCCTAATGCTACACCCCCAAACCAAATGCCATCATTGGATCCCACAATTGTGGCCCTCGTTTGTGTCTTCTTGTTCGTCGGCTTCTTCTCCGTCTACCTCCACCACTCCTTCAATGCCCACGGTGGCCACCGGAGCATCACCAGCACTGATTTTCACTCAAACGGTATCGACCCCAAATTACTTAACACCTTCCCCATCCTCCCGTGCTCCGCCGTCGTTCGATATCTCAAGTCCGAGACCACGGCGGCGATGGCGGAGGAGTGTGCGGTGTGCTTGACGGAGTTCGACCACCGTGATAAGCTCCGGTTGCTCCCGACATGTAACCACGTGTTTCACCCTCCATGCATTGACGCGTGGTTGGCGTCTCACGTGACTTGCCCCGTGTGTCGCACGTGGCTGAAGTCGGCGGGGGATCGCCGCCGTCGCCATGGTGGAAACGATGTCGTTATAGTAATTCCGGATGAGGTTATGGATGAAAGATGTGAGAGTAGAAGGGAGCCTTATAATTGTTGGGAGAGAAGGAGTTTGGTGAGGTGTCATTCGACGGGTCACTCAACGGAGATGAAGGAGACGGAGGATTTGAGGAGACAGATTATGGTGGCTCACGGTGGAATGCGACGGTCCGTGAGCTACAATGTGTTCCGTTGA 765 0.5464 MINIIITLSHILVFLLLSSAVVVNGQSSSLPPPPAAAASPNATPPNQMPSLDPTIVALVCVFLFVGFFSVYLHHSFNAHGGHRSITSTDFHSNGIDPKLLNTFPILPCSAVVRYLKSETTAAMAEECAVCLTEFDHRDKLRLLPTCNHVFHPPCIDAWLASHVTCPVCRTWLKSAGDRRRRHGGNDVVIVIPDEVMDERCESRREPYNCWERRSLVRCHSTGHSTEMKETEDLRRQIMVAHGGMRRSVSYNVFR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2506 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 177 IPR013083 -
Mibi02g2506 254 ProSiteProfiles Zinc finger RING-type profile. 127 169 IPR001841 -
Mibi02g2506 254 Pfam Ring finger domain 126 169 IPR001841 -
Mibi02g2506 254 SMART ring_2 127 168 IPR001841 -
Mibi02g2506 254 CDD RING-H2_PA-TM-RING 126 169 - -
Mibi02g2506 254 FunFam E3 ubiquitin-protein ligase ATL6 83 175 - -
Mibi02g2506 254 PANTHER RING FINGER DOMAIN-CONTAINING 33 172 - -
Mibi02g2506 254 SUPERFAMILY RING/U-box 126 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2506 Mibi-ChrMibi02 31076473 31077237 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2506 11 238 Rapid Response to Elicitors AT3G05200 33.333 1.66e-34 126