Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2502 ATGACTCAAACCATTCAATTCAACTTCAGCCTTCTCCCATGGATTCAACTGATTTTCCTTTCACGCGCCGCCGCGCAATCCGCCGTGCAGCCGGTGCCGACGTTCGCATCCCACCAGAAGTGGGACCCATCAATGGCCGCCATGGTGGGTGCTCTGTTCTGCGCCTTCATATTCATGGGCTTCTTCTCCGTCTATCTCCGCCATTGCTCCTCCCAGCAATCCCCATCCAACGGTGGAGATTGGCCTTGTTCTTGCTCTGAGGGAATTGACCGAAAAGTCCTTGACACCTTCCCCATCTTAGTCTATTCCACCATCAAAGACCTCAACATTGGTAAAGAAGGAGACCTTGAATGTGCAGTTTGCTTGAACGAGTTCAAGGATTGTGAAACTCTAAGGTTGCTTCCTAAGTGTAATCACGTGTTCCATCCTTCTTGTATCGAAGCTTGGCTCACTTCTCACGTGACTTGCCCTGTTTGCCGGGAAAAGCTGAATCCGGATTACGATCATGTGGCCATAACGGTTACTCCTGAATTGAACGTTATTGGGGGTAATGGTAATGATGAAAATGAGGAGAAGGAGGAGGAAGGAAAAGAAAAAGATGGGATTTTTGAAGGAGAGGATGGTGAGAACGCCGGCGGCGGCGGCGGCACGGTGGCGGTTACCGGAGACCGGTTGGGGTCGACGACGGCGGAGTTGAGGAGGTCGAATTCGACGGGTCATTGTGAGGTGGAGAGGTGTACACTGAGGTTGCCGGAGGATGTTCGGAGGTATATTCTGGCGAATAGCCGGCGGTCGGCGAGTTATGACAACGTGAGAGTGTGCATGGGAGGGAGTCCGAGGAAAGGGTTGTGTAGGAATGAGAAGCATAAGGAAGATCTTGTTCATACTCCATCACTTGTTGCTTGA 906 0.5143 MTQTIQFNFSLLPWIQLIFLSRAAAQSAVQPVPTFASHQKWDPSMAAMVGALFCAFIFMGFFSVYLRHCSSQQSPSNGGDWPCSCSEGIDRKVLDTFPILVYSTIKDLNIGKEGDLECAVCLNEFKDCETLRLLPKCNHVFHPSCIEAWLTSHVTCPVCREKLNPDYDHVAITVTPELNVIGGNGNDENEEKEEEGKEKDGIFEGEDGENAGGGGGTVAVTGDRLGSTTAELRRSNSTGHCEVERCTLRLPEDVRRYILANSRRSASYDNVRVCMGGSPRKGLCRNEKHKEDLVHTPSLVA 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2502 301 FunFam E3 ubiquitin-protein ligase ATL6 82 166 - -
Mibi02g2502 301 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 168 IPR013083 -
Mibi02g2502 301 SUPERFAMILY RING/U-box 110 169 - -
Mibi02g2502 301 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
Mibi02g2502 301 CDD RING-H2_EL5_like 117 160 - -
Mibi02g2502 301 PANTHER RING FINGER DOMAIN-CONTAINING 36 163 - -
Mibi02g2502 301 MobiDBLite consensus disorder prediction 186 206 - -
Mibi02g2502 301 SMART ring_2 118 159 IPR001841 -
Mibi02g2502 301 Pfam Ring finger domain 117 160 IPR001841 -
Mibi02g2502 301 MobiDBLite consensus disorder prediction 181 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2502 Mibi-ChrMibi02 30984905 30985810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2502 11 282 Rapid Response to Elicitors AT3G05200 39.590 7.96e-54 178