Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2495 ATGGCTCCGCCACCACCGGCGGATCACAAAGGCGAGTCCTCCGCCAGTGATTCTCAGAGATCTATTCCAACGCCTTTCTTAACCAAAACCTATCAACTCGTTGAAGATCATTCCATAGACGACGTTATCTCCTGGAACGAAGATGGCTCCAGTTTCGTCGTTTGGAATCCTACCGTCTTCGCCAGAGATTTGCTCCCTAAATACTTTAAACACAACAATTTCTCCAGCTTCGTCCGCCAACTCAACACCTATGGATTCAGGAAAGTAGTTCCCGATCGGTGGGAATTCACGAACGAGTGTTTTCGCAGAGGAAAGAGGCAACTTCTGTGCGAGATTCAGCGTCGGAAAATCTCACCGTCAGTTCCGGCGAATTCGCCGCCGTTGACGACGGCGATACCGACGGCGAAGCCGATAATTTCGCCGTCGAACTCAGGTGAAGAGCAAGCCAATTCGTCGATAAATTCGTCTCCTACCAGAGCTCCGGCAGATCTCGTGAACGAGAACGAGAGGCTGAGAAAAGAGAACGTTCAGCTAAGCAAGCAATTAGCAGAGATGAGATCTCTGTGCAACAACATATTCAATCTCATGTCAAAATACGTAAATAATAACCAAAATAGTAGGACGGCTGATTTCTCCGCCGTGAAACCGCTCGATTTGATGCCGCCGGCGAGGAACTCCGGTGACCTGAGCACGGCGGCGGAAGAAGAAATGAATCCGAAGCTGTTTGGTGTGGCGATAGGAACGAAGAGATCACGAGAAGGAGGCGGTGGGGGCGGTGATCCAGTGCTACGCATGCACAGGGTGGGGCCCATGGAGGTGAAATCTGAGCCGTTGAGTTGCCAGAGGCGTCGAGATAATCAGGAAGTGCCGTGGCTGAATCAATGCCATGAAGCGAATCAGAGAGTTTGTAATTGA 915 0.5071 MAPPPPADHKGESSASDSQRSIPTPFLTKTYQLVEDHSIDDVISWNEDGSSFVVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFTNECFRRGKRQLLCEIQRRKISPSVPANSPPLTTAIPTAKPIISPSNSGEEQANSSINSSPTRAPADLVNENERLRKENVQLSKQLAEMRSLCNNIFNLMSKYVNNNQNSRTADFSAVKPLDLMPPARNSGDLSTAAEEEMNPKLFGVAIGTKRSREGGGGGGDPVLRMHRVGPMEVKSEPLSCQRRRDNQEVPWLNQCHEANQRVCN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2495 304 MobiDBLite consensus disorder prediction 137 162 - -
Mibi02g2495 304 ProSitePatterns HSF-type DNA-binding domain signature. 65 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g2495 304 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 16 222 IPR027725 -
Mibi02g2495 304 Coils Coil 168 188 - -
Mibi02g2495 304 MobiDBLite consensus disorder prediction 137 164 - -
Mibi02g2495 304 MobiDBLite consensus disorder prediction 1 22 - -
Mibi02g2495 304 FunFam Heat stress transcription factor B-4 18 116 - -
Mibi02g2495 304 PRINTS Heat shock factor (HSF) domain signature 26 49 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g2495 304 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g2495 304 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g2495 304 Pfam HSF-type DNA-binding 26 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g2495 304 SUPERFAMILY "Winged helix" DNA-binding domain 23 115 IPR036390 -
Mibi02g2495 304 Gene3D - 18 116 IPR036388 -
Mibi02g2495 304 SMART hsfneu3 22 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2495 Mibi-ChrMibi02 30781029 30782288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2495 2 304 HSF AT5G62020 48.589 1.05e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi02g2495 HSF_DNA-bind 2.5e-33 CL0123