Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2493 ATGGGCCTTATTGGGGAATTTGATCATAGTTTGATGGGTAGGATGAGGGATGATGGGTATGAGAGTAGATCCGGGAGTGATAATTTTGAGGGGGTTTCCGGCGACGATCAGGATGCCGCCGGTGGCGGCGGGGACGATCAGCCTCAGAGAAGAAAGAAATATCATAGACACACTCCTCATCAAATTCAAGAGCTTGAAGCATTTTTCAAGGAGTGTCCTCATCCTGATGAGAAGCAGAGGATGGAACTTAGTAAGAGGCTGAATTTGGAGAATAAACAGATCAAGTTTTGGTTTCAAAATAGAAGAACTCAAATGAAGACTCAATTAGAACGCCATGAGAACATAATTCTCAGACAAGAGAATGATAAACTCCGAGCTGAGAATAGTATGATAAAGGAAGCCATGGCTAACCCGATGTGTAACCGATGCGGTGGCCCAGCCATTCCTGGCCAAATTTCATTTGAGGACCACCATCTCAGAATTGAAAATGCTCGGCTTAAGGATGAATTGAATCGAATATGTGCCTTGGCGAACAAGTTCCTGGGCAGGCCACTTTCGTCCTTGGCCAGCCCCACTGCTGTTCTGGGTTCGAATTCTGGTCTTGAACTCGCTATAGGGAGGAGCGAAATTGGTGGCTCGAGCACTCTAGGTTCTTCCTTGCCAATGGGGCTTGATTTAGGGGAAGGTATTATGGGAATGCCTTCGCCAATGCCCCGAATTAGATCGCCAATGGGAATGATGGGAGGCGAATTTCAGGTTGATAGGTCTACGCTCATCGATCTTGCACTGTCTGCTATGGAGGAATTAATGAAGATGGCTCAGACGGATAGCCCTCTCTGGGTTAAGTGTTTGGGTGGTGAGAGAGAGATTCTGGACCATGAGGAGTATGATAGGATAGTTTCTTCTTGTACTGGCCCAAAACCGGCTGGTTTTGTAACTGACGCTTCAAGGGAAACTGGGATAGTCATCATAAACAGTCTAGCCCTCGTGGAGACTTTGATGGATGCGAACCGGTGGGCGGAAATGTTTCCCTCATTGATAGCTAGAGCTGCAACTGTTGATGTAATATCAAATGGTATGGGTGGAACCAGAAATGGTGCTTTGCAAGTGATGCATGCTGAGGTTCAATTGCTTTCACCACTCGTCCCTGTGCGTCAGTTGAGATTTCTCCGGTTTTGCAAGCAGCATACGGAAGGTGTGTGGGCTGTAGTTGACGTTATGGTTGAGATTGGCCATAGTTCAATCAATGGCCACTCGTTTTTGAGCTGTAGGAGGCTTCCTTCTGGCTGTCTCGTGCAAGATATGCCCAATGGTTACTCTAAGGTTACATGGGTTGAGCATACACAGTACGATGAAAGTGTCGTTCACCAATTGTACCGGCCATTGGTTAATTCTGGCGTCGGCTTCGGTGCTTATAGGTGGATCGCCACCCTTCAAAGGCAATGTGAATGCTTGGCAATCCTCATGTCCTCTTCTTTACCCAATGAGGATCCTACAGCATTAAGCCAAGCTGGTAGGAGAAGTTTATTGAAGCTGGCACAACGCATGACTAACAACTTCTGTTCCGGGGTTTGTTTATCGTCGACGCGCAAGTGGGACAGCCTTCACATTGGCACACTTGGTGATGATGTGAAGGTGATGACCCGGAAGAACGTGGATGACCCTGGCGAGCCACCCGGGATCGTGCTGAGCGCCGCTACTTCTGTTTGGATTCCGGTGTCCCGGGAGAGTTTGTTCAATTTCCTGCGTGATGAACGGCTTAGAAGTGAGTGGGACATTTTGTCGAATGGGGGGCCGATGCAGGAGATGGTCCATATTGCCAAAGGTCAAGGTTCTGGAAATTGTGTGTCTCTACTTCGTGCCAGCGCTGTGAATCCCAACGAGAGCAATATGGTAATTCTACAAGAAACATGGACAGACCCGTCATGCTCGGTGGTGGTCTATGCTCCGGTCGACGTTCAATCCTTAAACGTCGTAATGAGCGGCGGAGACTCTGCCTACGTCGCTCTCTTACCTTCCGGTTTCGCCATCCTCCCAGACGGCCGCCAATCCAGCCTCAGCAGCAGCCTACTCAAAGGTGACGACGGCCAAGACCAAGGATGCCTCCTCACCGTTGGGTTCCAGATTCTCGTAAACAGCCTTCCGACCGCGAAACTCACGGTGGAATCCGTCGAGACAGTGAACAACCTCATTGCTTGCACCATTCAGAAGATTAAAAGTTCACTACCAGTTGCATGA 2238 0.4893 MGLIGEFDHSLMGRMRDDGYESRSGSDNFEGVSGDDQDAAGGGGDDQPQRRKKYHRHTPHQIQELEAFFKECPHPDEKQRMELSKRLNLENKQIKFWFQNRRTQMKTQLERHENIILRQENDKLRAENSMIKEAMANPMCNRCGGPAIPGQISFEDHHLRIENARLKDELNRICALANKFLGRPLSSLASPTAVLGSNSGLELAIGRSEIGGSSTLGSSLPMGLDLGEGIMGMPSPMPRIRSPMGMMGGEFQVDRSTLIDLALSAMEELMKMAQTDSPLWVKCLGGEREILDHEEYDRIVSSCTGPKPAGFVTDASRETGIVIINSLALVETLMDANRWAEMFPSLIARAATVDVISNGMGGTRNGALQVMHAEVQLLSPLVPVRQLRFLRFCKQHTEGVWAVVDVMVEIGHSSINGHSFLSCRRLPSGCLVQDMPNGYSKVTWVEHTQYDESVVHQLYRPLVNSGVGFGAYRWIATLQRQCECLAILMSSSLPNEDPTALSQAGRRSLLKLAQRMTNNFCSGVCLSSTRKWDSLHIGTLGDDVKVMTRKNVDDPGEPPGIVLSAATSVWIPVSRESLFNFLRDERLRSEWDILSNGGPMQEMVHIAKGQGSGNCVSLLRASAVNPNESNMVILQETWTDPSCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGRQSSLSSSLLKGDDGQDQGCLLTVGFQILVNSLPTAKLTVESVETVNNLIACTIQKIKSSLPVA 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2493 745 SUPERFAMILY Bet v1-like 253 484 - -
Mibi02g2493 745 ProSiteProfiles 'Homeobox' domain profile. 48 108 IPR001356 GO:0003677
Mibi02g2493 745 Coils Coil 102 137 - -
Mibi02g2493 745 FunFam Homeobox-leucine zipper protein GLABRA 2 260 483 - -
Mibi02g2493 745 SMART HOX_1 50 112 IPR001356 GO:0003677
Mibi02g2493 745 SMART START_1 260 484 IPR002913 GO:0008289
Mibi02g2493 745 ProSitePatterns 'Homeobox' domain signature. 83 106 IPR017970 GO:0000981|GO:0006355
Mibi02g2493 745 SUPERFAMILY Bet v1-like 512 739 - -
Mibi02g2493 745 CDD START_ArGLABRA2_like 255 483 - -
Mibi02g2493 745 Gene3D - 43 122 - -
Mibi02g2493 745 ProSiteProfiles START domain profile. 251 487 IPR002913 GO:0008289
Mibi02g2493 745 MobiDBLite consensus disorder prediction 10 24 - -
Mibi02g2493 745 SUPERFAMILY Homeodomain-like 35 108 IPR009057 -
Mibi02g2493 745 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 49 742 IPR042160 -
Mibi02g2493 745 FunFam Homeobox-leucine zipper protein HDG1 36 124 - -
Mibi02g2493 745 Pfam START domain 261 484 IPR002913 GO:0008289
Mibi02g2493 745 MobiDBLite consensus disorder prediction 1 58 - -
Mibi02g2493 745 CDD homeodomain 51 108 IPR001356 GO:0003677
Mibi02g2493 745 Pfam Homeodomain 51 106 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2493 Mibi-ChrMibi02 30734427 30740169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2493 16 742 Homeobox Transcription Factor Family AT3G61150 60.160 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi02g2493 START 8.4e-49 CL0209