Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2487 ATGGGCTTTCTCCGGCGACTCTTCGGCGGCGCCAAAAGCTCCGACCATTCCTCCGGTAAGAAGAAATGGAGCTTCGTAAAGAAATCCAAGAATCACAAATCTCACGCTTCTAATTCCAAAGGATCTGATCTCACCCACTTCGATTCCTCCACCACTTTCTCCGATTCCTTAGATGCCAACAAGCATGCCATTGCCGTCGCCGCCGCTACCGCCGCCGTCGCAGAGGCCGCTCTCGCTGCAGCCCACGCCGCCGCCGAGGTCGTCCGACTCACCAGTGGGCCCACCGTCTCTCGGCCGGTGAGTGCGGCTCCGGCCACCGCTAGCCACCGCCGGTGGGTGGAGGAAGCCGCCGCCGTTAAAATTCAGTCCTCTTTCCGGTCTTATCTGGCAAGGAGAGCACTACGGGCACTCAAAGCATTGGTGAAACTACAAGCACTGGTGAGAGGCCACATAGTAAGAAAGCAAACTGCAGATATGCTCAGGCGCATGCAAACATTAGTCAGATTGCAGACGCGGGCACGTGCAAGTCGTGCCCACATGTCGGATCATCTATATTCTAGCAAGTCTGCACTGTTTTATCATCCTGTCCCTGAAGATCATGAGCATCCACTTCGTGGCTATAGTACTAATTTAGATGGATCTTCCATCCTCAAGAGATGCAGCTCCAATGCAAACTTTAGGGAGATTGGCCCACAGAGAGCACAGTTTGGATCACAATGGTTGGATCGTTGGATGGAAGAAAGTGTTTGGAGTCAACCCAGAGACGTTCCACTGAGAAATGTGCGTGCCGATGATGAGAAGAGTGCCAAGATCCTTGAAGTGGACACATGGAAACCACACTTCAGGTCTCACCGAAGTAGCAGCTCCTTCCACGCAGCATCTCAATACTACTTAACTTCTGACTACTTCAACAACAGCGAGATAACTTACGACTCTCCATCGAAAAGTTCAGCAAAAGCACTAAACCAAAGCCTCTCATCACTCACATCCTTGAAAATTCAGAAAGGAAAAGAAGCAGTATCAGCTTCAAGAAATGCTGAGAATAGCCCACAAGCAATTTCTGTAGCTTCATCTAGGCCTGGAAGTGGAGGTGGTAGAAGAGGCCCTTTTACACCCACAAGAAGTGAGTGTTCTTGGGGTTACTTTGGCTATCCAAATTACATGGCCAACACTGAATCATCAAGGGCTAAGGTTAGATCTCAAAGTGCTCCCAAGCAAAGGTTGGAGTTTGATAGATGTAGTTCAAGTGGGAGAAGTGTTCAAGGGTTATGGGATTATTCAGATAAGGATGGAGATTTAAGGAACAGAGCCTATCCAGCTTCGACCCGCTTAAACAGAGTTGGAAGTACCAATTTAAGGTGA 1362 0.4949 MGFLRRLFGGAKSSDHSSGKKKWSFVKKSKNHKSHASNSKGSDLTHFDSSTTFSDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGPTVSRPVSAAPATASHRRWVEEAAAVKIQSSFRSYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQTRARASRAHMSDHLYSSKSALFYHPVPEDHEHPLRGYSTNLDGSSILKRCSSNANFREIGPQRAQFGSQWLDRWMEESVWSQPRDVPLRNVRADDEKSAKILEVDTWKPHFRSHRSSSSFHAASQYYLTSDYFNNSEITYDSPSKSSAKALNQSLSSLTSLKIQKGKEAVSASRNAENSPQAISVASSRPGSGGGRRGPFTPTRSECSWGYFGYPNYMANTESSRAKVRSQSAPKQRLEFDRCSSSGRSVQGLWDYSDKDGDLRNRAYPASTRLNRVGSTNLR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2487 453 MobiDBLite consensus disorder prediction 339 371 - -
Mibi02g2487 453 PANTHER IQ-DOMAIN 5-RELATED 15 421 - -
Mibi02g2487 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 159 IPR027417 -
Mibi02g2487 453 Gene3D - 114 166 - -
Mibi02g2487 453 SMART iq_5 136 157 IPR000048 GO:0005515
Mibi02g2487 453 SMART iq_5 113 135 IPR000048 GO:0005515
Mibi02g2487 453 Pfam IQ calmodulin-binding motif 138 155 IPR000048 GO:0005515
Mibi02g2487 453 Pfam IQ calmodulin-binding motif 116 135 IPR000048 GO:0005515
Mibi02g2487 453 Pfam Protein of unknown function (DUF4005) 342 408 IPR025064 -
Mibi02g2487 453 MobiDBLite consensus disorder prediction 339 358 - -
Mibi02g2487 453 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Mibi02g2487 453 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Mibi02g2487 453 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2487 Mibi-ChrMibi02 30534926 30540036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2487 1 426 IQD Protein Family AT5G07240 44.695 5.17e-65 214