Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2472 ATGGGTTCTTCACTTCTTCTCTACTCTCCTTCTCCCACCCGATTCTCCTTTCTCCCTCCAACACTTTCTCTCTCTCCCCTTCGTCTCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTCCCTGCGAAGCAGAAATCTCTCAAGGACAATTTCAACCCCTCTTGCCTATGTAACCGGACCCGCTTCCGACCCCATTTTCAGTGAATCCGACCCGAAACTTGATGGGCCGGATCCTCGGCCCGAGAAACTCCGGCCACCCACCGTTATTAGCTGGGGGCTTCTATGGACGCTTTTGATGAAACACAAATTTCGGCTTCTGGTTTCAGTTGTCACTCTTATTTGTTGCACCACTTGTACTCTTTCTATGCCCTTATTCTCTGGTCAATTTTTTGAGGTTTTAATTGGGGCAAGACCAGAACCATTATGGAGGCTGCTTAGTCAGATTGGAATCCTGTATGCCATTGAGCCAATTTTAACTATTACTTTTGTTACAAACATGAACATAATGTGGGAGAAGATTATGTCAACATTAAGAGCACAAATCTTTGGAAGGATATTGATGCAAAAGGTGGAATTTTTTGACAGATACAAGGTTGGTGAACTCACCGGTTTGCTAACGTCCGATTTGGGTTCTCTTAAAGATATTGTGAGTGAAAATGCTGCAAGGGATCGTGGATTCAGGGCATTATCTGAGGCAAGCATTTCTTCACCAATCAGAAGCCATTGGGACAATATGCATACTTTTTGCTTTGTCGCCTCAACTTGCTCCAATATTGGGTATCCTAATGCTCACAGTTTCTGTTTCACTGTCTACAAGAGATCAACTCTGCCGGTTTTTAAAGCACATGGGGTTGTCCAAGCATCCATATCTGATTGTGTGGCAGAAACATTTTCTGCTATCCGTACAGTAAGATCCTTTGGTGGAGAGAAACGCCAAATGTTTACTTTTGCTAACCAGGTTCTTTCTTACCAATCCAGCGGGATAAAGCTTGCAACTTTTAAATCTCTAAATGAGTCGATGACTAGAGTTGCTGTTTATGTTTCTTTGCTATCATTATACATCCTTGGAGGAAATAAAGTTAAAGCGGGTGAACTCTCTGTTGGAACTATGGCGTCTTTTATTGGTTATACTTTCACATTAAATTTTGCTGTTCAAGGAGTCGTCAATACTTTTGGAGATCTACGTGGAGCCATTGCTGCCGTTGAGAGGATCAATAATGTTTTCTCAGAGGTTCAAATTGATGAAGCCCTGGCTTATGGCTTAGAAAGAGAACTGAAACAGAAAGAACTAAATGAGGATAACTATAAACTGTTCTTCTCTGATAATTACACTGAGAAAAACCAACAGAAATACTTGCATTACATGTCAGCATTGAAATCATCAAGCTATTTATACAGCTTAGCTTGGTCTGGAGATGTTTGTCTTGAAGATGTGTATTTCTCTTATCCTTTAAGGCCAGATGTGGAAATCTTAGGTGGCTTAAATTTAACACTAAAATGTGGTACTATAACTGCATTGGTGGGTCCTAGTGGTGCAGGAAAAAGTACAATAGTACAGCTATTGGCTCGGTTTTATGAGCCAACAAGAGGTCATATAACAGTTGCTGGAGAGGATGTTCGTACGTTTGACAAGAGTGAGTGGGCCCGGGCCATCTCTATTGTAAATCAAGAGCCTGTTCTGTTTTCTGTGTCTGTTGGAGAAAATATTGCATATGGGCTTCCAGATGATGATGTTTCTAAAGAAGATGTGATCAAGGCAGCAAAAGCTGCAAATGCTCACGACTTCATACTTTCACTTCCACAGGGCTATGATACACTTGTTGGCGAGCGTGGAGGCCTATTAAGCGGGGGACAGAGGCAGAGAATTGCTATTGCGCGAGCACTCTTAAAGAATGCCCCAATCCTTATACTTGATGAGGCCACTAGTGCCTTAGATACAGTAAGTGAGAAGTTGGTCCAGGAGGCTCTCAACCATTTGATGAAGGGGAGGACAACACTAGTGATAGCTCACCGATTGAGCACAGTTCAAAATGCCCATCAAATTGCACTCTGCTCTGAGGGCAAGATTGCAGAACTAGGAACACACCATGAGTTGTTGGCTAAGAAGGGCCAATATGCTTCACTGGTTGGTACTCAAAGGCTCGCATTTGAATGA 2157 0.4251 MGSSLLLYSPSPTRFSFLPPTLSLSPLRLPSSSSSSSSSLSLRSRNLSRTISTPLAYVTGPASDPIFSESDPKLDGPDPRPEKLRPPTVISWGLLWTLLMKHKFRLLVSVVTLICCTTCTLSMPLFSGQFFEVLIGARPEPLWRLLSQIGILYAIEPILTITFVTNMNIMWEKIMSTLRAQIFGRILMQKVEFFDRYKVGELTGLLTSDLGSLKDIVSENAARDRGFRALSEASISSPIRSHWDNMHTFCFVASTCSNIGYPNAHSFCFTVYKRSTLPVFKAHGVVQASISDCVAETFSAIRTVRSFGGEKRQMFTFANQVLSYQSSGIKLATFKSLNESMTRVAVYVSLLSLYILGGNKVKAGELSVGTMASFIGYTFTLNFAVQGVVNTFGDLRGAIAAVERINNVFSEVQIDEALAYGLERELKQKELNEDNYKLFFSDNYTEKNQQKYLHYMSALKSSSYLYSLAWSGDVCLEDVYFSYPLRPDVEILGGLNLTLKCGTITALVGPSGAGKSTIVQLLARFYEPTRGHITVAGEDVRTFDKSEWARAISIVNQEPVLFSVSVGENIAYGLPDDDVSKEDVIKAAKAANAHDFILSLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDTVSEKLVQEALNHLMKGRTTLVIAHRLSTVQNAHQIALCSEGKIAELGTHHELLAKKGQYASLVGTQRLAFE 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2472 718 MobiDBLite consensus disorder prediction 62 82 - -
Mibi02g2472 718 SMART AAA_5 501 695 IPR003593 -
Mibi02g2472 718 ProSitePatterns ABC transporters family signature. 615 629 IPR017871 GO:0005524|GO:0016887
Mibi02g2472 718 SUPERFAMILY ABC transporter transmembrane region 95 219 IPR036640 GO:0005524|GO:0016020
Mibi02g2472 718 CDD ABC_MTABC3_MDL1_MDL2 476 713 - -
Mibi02g2472 718 FunFam ATP-binding cassette sub-family B member 8, mitochondrial 472 716 - -
Mibi02g2472 718 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 474 712 IPR003439 GO:0005524
Mibi02g2472 718 Gene3D ABC transporter type 1, transmembrane domain 264 416 IPR036640 GO:0005524|GO:0016020
Mibi02g2472 718 Pfam ABC transporter transmembrane region 267 384 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g2472 718 Pfam ABC transporter transmembrane region 106 220 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g2472 718 Pfam ABC transporter 494 643 IPR003439 GO:0005524
Mibi02g2472 718 Gene3D - 472 715 IPR027417 -
Mibi02g2472 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 464 713 IPR027417 -
Mibi02g2472 718 SUPERFAMILY ABC transporter transmembrane region 268 410 IPR036640 GO:0005524|GO:0016020
Mibi02g2472 718 Gene3D ABC transporter type 1, transmembrane domain 81 223 IPR036640 GO:0005524|GO:0016020
Mibi02g2472 718 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 69 716 - -
Mibi02g2472 718 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 107 397 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2472 Mibi-ChrMibi02 30068240 30075002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2472 471 718 Calmodulin-binding Proteins AT2G36910 54.980 3.46e-76 265