Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2469 ATGGCTGTTTGGCTTGTTGGTATAAATACCCTCAAGATTCAGCCTTTCAAGCTCCCACCTCTGGGCCCTCATGATGCCAGAATTCGGATCAAAGCTGTTGGTATCTGTGGCAGTGATGTTCACTACTTCAGGAAAATGAGAAATGCACATCGTGTAATGAAAAAACCCATGGTAATGGGCCATGAGTGTGCAGGGATCATAGAGGAAATTGGCAGTGAAGTAAAGAATGTGGTACCTGGTGACCGTGTGGCAATTGAACCTGGGATTAGTTGCTCCCATTGTGACCTCTGCAAGAATGGCCGATACAACTTATGTCCTAATATGAAGTTCTTTGCTAGTCCTCCAGTTCATGGTTCTCTTGCAAATCAGATAGTGCATCCTGCAAGCCTATGTTTCAAATTGCCAGACAATGTGAGCTTGGAGGAGGGGGCAATGTGCGAGCCCTTGAGTGTTGGTGTTCATGCATGCCGTCGGGCTAATATTGGACCGGAAACAAATGTGTTGATCATGGGAGCAGGACCAATTGGACTTGTCACAATGCTTTCAGCTCATGCCTTTGGGGCACCCAGGATTGTCATTGTTGATGTGGATGAGCATCGTTTATCTGTTGCAAAATCTCTTGGTGCAGATGAGACTGTTAAAGTTTCAGCAAATATTGAAGATGTGAGTGAAGAAGTTGAACACATACACAAGGCTATGGGAAGTAAGGTGGATGTTAGCTTTGATTGTGCAGGTTTCAACAAAACTATGACCACTGCATTGTATGCCACTCATGCAGGTGGCAAAGTGTGCCTTGTAGGAATGGCACTAACTCAAATGAATATTCCCCTCACACTGTCTACTGTAAGGGAAGTAGATGTAATTGGGATATTCCGTTACAAGAACACATGGCCTCTTTGTTTGGAATTTCTAAGAAGTGGGAAGATCAATGTGAAACCTCTTATAACTCATAGATTTGGATTCTCTCAAAAGGAGGTTGAAGAAGCCTTTGAAACCAGTGCTCATGGTGGCAATGCTATCAAGGTTATGTTCAATATGTAA 1041 0.4361 MAVWLVGINTLKIQPFKLPPLGPHDARIRIKAVGICGSDVHYFRKMRNAHRVMKKPMVMGHECAGIIEEIGSEVKNVVPGDRVAIEPGISCSHCDLCKNGRYNLCPNMKFFASPPVHGSLANQIVHPASLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLSAHAFGAPRIVIVDVDEHRLSVAKSLGADETVKVSANIEDVSEEVEHIHKAMGSKVDVSFDCAGFNKTMTTALYATHAGGKVCLVGMALTQMNIPLTLSTVREVDVIGIFRYKNTWPLCLEFLRSGKINVKPLITHRFGFSQKEVEEAFETSAHGGNAIKVMFNM 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2469 346 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 60 74 IPR002328 GO:0008270|GO:0016491
Mibi02g2469 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 137 310 IPR036291 -
Mibi02g2469 346 Gene3D - 151 291 - -
Mibi02g2469 346 PANTHER SORBITOL DEHYDROGENASE 1 346 - -
Mibi02g2469 346 SUPERFAMILY GroES-like 2 172 IPR011032 -
Mibi02g2469 346 FunFam Sorbitol dehydrogenase 151 291 - -
Mibi02g2469 346 Pfam Alcohol dehydrogenase GroES-like domain 23 134 IPR013154 -
Mibi02g2469 346 Gene3D - 10 332 - -
Mibi02g2469 346 CDD sorbitol_DH 2 346 IPR045306 GO:0016616
Mibi02g2469 346 Pfam Zinc-binding dehydrogenase 174 304 IPR013149 -
Mibi02g2469 346 SMART PKS_ER_names_mod 7 344 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2469 Mibi-ChrMibi02 30047071 30053793 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2469 13 277 Monolignol Biosynthesis Gene Families AT4G37980 26.449 1.22e-17 80.5