Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2462 ATGGGTAAAGGTAGTGAAGGTCATGGAGGAGAAGAAAATATGGCCGCTTGGCTTGTTGGCATAAACACCCTCAAGATTCAACCTTTCAAGCTTCCTACTCTAGGTCCCCATGATGTCAGAATTCGAATGAAAGCTGTTGGTATTTGTGGAAGTGATGTTCACTACCTCAAGACAATGAGAATAGCAGATTTTGTAGTGAAAGAACCAATGGTGATTGGCCATGAGTGTGCAGGGATCATAGAAGAAGTTGGTAGTGAGGTTAAGAATCTCATACCTGGTGACCGTGTAGCAATTGAGCCTGGAATCAGTTGTGCACGTTGTAGCCCCTGCAAACAAGGTCGATATAATTTATGCCCGGAAATGAAGTTCTTTGCTACTCCACCAGTTCATGGTTCCCTTGCTAACCAGATAGTGCATCCAGCAGACCTATGTTTTAAACTACCAGACAGTGTGAGCTTGGAGGAGGGGGCAATGTGCGAACCTCTGAGCGTTGGCGTTCACGCTTGTCGCCGAGCTAATGTTGGACCAGAAAAAAATGTGATGATCATGGGAGCAGGTCCCATAGGACTTGTCACGATGCTTTCAGCTCGAGCTTTTGGAGCACCTAGGATTGTCATTGTGGATGTGGATGACCATCGTTTATCTGTTGCAAAATCTCTTGGTGCAGATGAGACTGTTAAAGTTTCAACAAAAATTGAGGATGTGAATGAAGAAGTTGAACATATACATAAGGCAATGGGAAGTAGGGTAGATGTTAGCTTTGATTGTGCAGGTTTTAACAAAACTATGACTACTGCATTGAATGCCACTCATGTAGGTGGTAAAGTGTGCCTTGTGGGAATGGGTCATAGTGAAATGACTATTCCACTCATGCCTGCTGCTACAACAAGGGAAGTTGATGTCATTGGAATTTTCCGTTACAAGAACACATGGCCTTTGTGTCTGGAATTTCTGAAGAGTGGGAAGATAGATGTGAAACCTCTTATAACTCACAGGTTTGGATTCTCTCAGAAGGAGGTTGAAGAAGCCTTTGAAACCAGTGCTCGTGGTGGCAATGCTATTAAGGTCATGTTCAATCTATAA 1083 0.4358 MGKGSEGHGGEENMAAWLVGINTLKIQPFKLPTLGPHDVRIRMKAVGICGSDVHYLKTMRIADFVVKEPMVIGHECAGIIEEVGSEVKNLIPGDRVAIEPGISCARCSPCKQGRYNLCPEMKFFATPPVHGSLANQIVHPADLCFKLPDSVSLEEGAMCEPLSVGVHACRRANVGPEKNVMIMGAGPIGLVTMLSARAFGAPRIVIVDVDDHRLSVAKSLGADETVKVSTKIEDVNEEVEHIHKAMGSRVDVSFDCAGFNKTMTTALNATHVGGKVCLVGMGHSEMTIPLMPAATTREVDVIGIFRYKNTWPLCLEFLKSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2462 360 CDD sorbitol_DH 15 359 IPR045306 GO:0016616
Mibi02g2462 360 Pfam Zinc-binding dehydrogenase 187 318 IPR013149 -
Mibi02g2462 360 SMART PKS_ER_names_mod 20 358 IPR020843 GO:0016491
Mibi02g2462 360 Gene3D - 164 305 - -
Mibi02g2462 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Mibi02g2462 360 PANTHER SORBITOL DEHYDROGENASE 12 360 - -
Mibi02g2462 360 SUPERFAMILY GroES-like 13 185 IPR011032 -
Mibi02g2462 360 FunFam Sorbitol dehydrogenase 164 305 - -
Mibi02g2462 360 Gene3D - 23 347 - -
Mibi02g2462 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 151 324 IPR036291 -
Mibi02g2462 360 Pfam Alcohol dehydrogenase GroES-like domain 36 147 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2462 Mibi-ChrMibi02 29919872 29923020 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2462 26 292 Monolignol Biosynthesis Gene Families AT4G37980 26.619 5.59e-17 78.6