Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2427 ATGCCCTCGAATTGTTTCTGTTGTTTCCTCCCACAAGAAGAACACCAACAAGTTAAAACAAGGAGTGACAGCAAAAATAGGGACTATCCATGGGAAATGTACACGTTGAAGGAGTTGCTTCGAGCAACAAACAATTTCCATCAAGATAACAAGATAGGAGAGGGTGGCTTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGCATCGAGATTGCAGTGAAGAGACTAAAGACGATGACTGCGAAAGCAGAGATGGAATTTGCAGTAGAAGTAGAAGTACTTGGAAGGGTGAGGCATAAGAACTTATTGGGTCTAAGAGGATTCTATGCAGGAGGAGAGGAAAGACTTATTGTTTACGATTACATGCCCAATCATAGCTTGCTCACTCATCTTCATGGCCAGCTCTCTTCAAGTTGTCAGCTAGATTGGCCTAAAAGAATGAGCATCGCCATTGGAGCAGCCGAAGGCTTAGCGTATCTGCACCATGAGGCGAATCCTCACATTATACATAGAGACATAAAGGCAAGCAACGTTCTTCTGGACTCTAATTTTCAAGCCAAAGTGGCTGATTTTGGATTTGCAAAGCTAATTCCAGAAGGTGTGAGCCATCTAACCACAAGGGTGAAAGGAACATTGGGCTATCTGGCACCAGAATACGCCATGTGGGGTAAGGTTTCAGAGAGCTGTGATGTGTATAGCTTTGGGATTTTGCTTTTGGAGATAATTAGTGCCAAGAAACCTATAGAGAAGCTACCAGGAGGCGTTAAAAGGGACATAGTTCAGTGGGTGACACCTTATATTCAAAAGGGTATATTCAACCATATTGCAGATCCAAAGTTGAAGGGCAAGTTTGAGATGGAGCAGTTGAAATCTGTGGTGGTGCTGGCTATGAAGTGCACCGATAGTAGCCCGGAGAAGAGGCCGAGTATGGCGGAGGTGGTGGAATGGCTCAAGGGCAGCCGTGGCGGCGGCGTTGCAAGGAGGAGGAAAGAGATTCCGGCAGCCATGAGGGATAAGCATGGTGATGAAGAAAAGGACAAGAATGATAAGGACTATGAAGACATGGGAAAGAGGCAATCCATGTTGAGAATACCAAGTGATAGATATAAAATAAGATGA 1119 0.4468 MPSNCFCCFLPQEEHQQVKTRSDSKNRDYPWEMYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGIEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGQLSSSCQLDWPKRMSIAIGAAEGLAYLHHEANPHIIHRDIKASNVLLDSNFQAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGVKRDIVQWVTPYIQKGIFNHIADPKLKGKFEMEQLKSVVVLAMKCTDSSPEKRPSMAEVVEWLKGSRGGGVARRRKEIPAAMRDKHGDEEKDKNDKDYEDMGKRQSMLRIPSDRYKIR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2427 372 FunFam PTI1-like tyrosine-protein kinase At3g15890 122 332 - -
Mibi02g2427 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Mibi02g2427 372 SMART serkin_6 46 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2427 372 Gene3D Phosphorylase Kinase; domain 1 9 121 - -
Mibi02g2427 372 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Mibi02g2427 372 Gene3D Transferase(Phosphotransferase) domain 1 122 327 - -
Mibi02g2427 372 SUPERFAMILY Protein kinase-like (PK-like) 27 320 IPR011009 -
Mibi02g2427 372 MobiDBLite consensus disorder prediction 322 372 - -
Mibi02g2427 372 FunFam PTI1-like tyrosine-protein kinase At3g15890 17 121 - -
Mibi02g2427 372 ProSiteProfiles Protein kinase domain profile. 46 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2427 372 PANTHER OS01G0253100 PROTEIN 22 319 IPR045271 -
Mibi02g2427 372 Pfam Protein kinase domain 46 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2427 372 MobiDBLite consensus disorder prediction 321 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2427 Mibi-ChrMibi02 28969306 28970835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2427 18 333 Receptor kinase-like Gene Family AT2G48010 42.679 9.46e-84 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mibi02g2427 Pkinase 1.7e-45 CL0016