Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2425 ATGTTTCCTTTACAACGAGGCAATGAGCTGGTGATACAATTTTCCGGGATTCCCAGTACTCAGAATAATCAAGAAAGCAAGATCTCATCAGAAGATCCGATTCTACAGGATGAATATGCATCTCCTCGTGTCATCAGCAATAATTCTGATAATAATAAAAGAATTATTGGTGACACCTCGACAAGGAACAACATATTTTCTCGAGCTAGCAGCAGCAGTAATATTAATAATAATCCTAACGAAAACAAGAAGAAGAAGATGATTCATAGAGAGATTGAGAGGCAAAGGAGGCAAGAAATGGCTTCCCTTTATGCTTCCCTTAGATCCCTTCTTCCTCTTGAGTACATCAAGGGAAAGCGATCGATATCGGATCATATGAATGAGGCAGTAAGTTATATAAAGCATTTACAGAAGAAAATTAAAGATCTTGATGCTAAGAGAGATGAACTGAAGAAAAACTCAGATAATACCTTGGAAACCCCTGATGATGAGGGTCAACAGAAGAAATCAATAAATTTTACTGTCCATGAGAAAAATGGGGTTGTGGGAATTGAAATTATAAGTAACTGGAAAGATGAAAGGTTCCTACTCTCAAAATTGCTTGAATTTCTTCTTGAAGAAGGCCTTGAAGTTGTTGCCTGTCTCACTACCCAAGTCAATGGTAGAATACTTCATAGTGTCAGCTGCCAGGTTAATAGTTCAAATAATAGTGTGGATCTACCTGAGCTGAGAAGGAAAATTGCAAGTTTATTTTCTTAG 759 0.3715 MFPLQRGNELVIQFSGIPSTQNNQESKISSEDPILQDEYASPRVISNNSDNNKRIIGDTSTRNNIFSRASSSSNINNNPNENKKKKMIHREIERQRRQEMASLYASLRSLLPLEYIKGKRSISDHMNEAVSYIKHLQKKIKDLDAKRDELKKNSDNTLETPDDEGQQKKSINFTVHEKNGVVGIEIISNWKDERFLLSKLLEFLLEEGLEVVACLTTQVNGRILHSVSCQVNSSNNSVDLPELRRKIASLFS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2425 252 SMART finulus 90 142 IPR011598 GO:0046983
Mibi02g2425 252 Coils Coil 126 160 - -
Mibi02g2425 252 MobiDBLite consensus disorder prediction 147 168 - -
Mibi02g2425 252 Pfam Helix-loop-helix DNA-binding domain 85 137 IPR011598 GO:0046983
Mibi02g2425 252 MobiDBLite consensus disorder prediction 15 35 - -
Mibi02g2425 252 MobiDBLite consensus disorder prediction 15 30 - -
Mibi02g2425 252 CDD bHLH_AtORG2_like 87 152 - -
Mibi02g2425 252 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 71 250 IPR015660 -
Mibi02g2425 252 FunFam Transcription factor bHLH126 76 164 - -
Mibi02g2425 252 Gene3D - 76 162 IPR036638 GO:0046983
Mibi02g2425 252 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 84 136 IPR011598 GO:0046983
Mibi02g2425 252 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 153 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2425 Mibi-ChrMibi02 28918544 28919568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2425 89 248 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 44.311 9.80e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi02g2425 HLH 2.8e-11 No_clan