Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2424 ATGCTCTCCCGCAAATTCTCCACCTCCCTTCCCAATCCAAACCCACCTTCTGCTTTCCCCCCAAATCAACCCAACCCCACTTCCAAATCCCACAAAAGCCACCACCTTTTGCCTCCCCTTGTTGCCTCCACCGCCTCCATATGCTCCTTCTTCCTCATCTTCCTCCTCTGCTTCCGCCGCCGCCTCTCCCGAAAAAAACCCACCACCCCTTCTTCTTCTTCTTCTTCTTCCTCCCCACCACCCAAACCCCCCTTCCATTTCTCCTACTCCCTCCTCCGCCGTGCCACGTCATCCTTCTCCACCCGCCTCGGCCACGGTGGCTTCGGCCCCGTATTCTCCGGAACCCTCCCTCAAACCCATCAGCCAATCGCCGTCAAGCTCATGGACTCTGCTTCCTTACAAGGAGAGAGAGAGTTTCACAACGAGCTCTTCTTTGCCTCAAGGCTGAAATCCCATTATGTGGTCCCCGCCATCGGGTTTTCATGCGACAGGAACCGACGGAGGTTCTTGGTTGTTTACGAGTTGATGCAACATGGGAATTTGCAGGATGCTTTGCTTCATCGTAGGTGTCCTGAGATGTTGGAGTGGGAGAGGCGGTTTAAGGTTGTTGTTGATGTGGCGAAGGGGATTCAGTATCTTCATCACTCTTGTGACCCGCCTGTGATTCATGGGGATATTAAGCCGAGTAATGTTCTGTTGGATTGTTCTTTGTCGGCCAAGATTGGGGATTTCGGTCTTGCTAGGTTGAAATCGGAACCCCAGGTTGAGATTGGGGTTTTGGGGTCTGAGGGTTTTGAGATGAAGAAGGGGAAGGAGGAGGAATTGGAGAGTAATGGTGGGTCAGTGGTTGAGGAGACACAGAGTGTGATTACTGTTGATGATGGTAGCTTAGCTGCTGACCAATCTCCTGAGGGTTTTGTTAGGATACCCATTTCGGAGCCGTCACCGGAGCCGGAGCCGGTGGAGGTGACGTCGCCTTTGGAGGCGAATTTCGATAAGGTGAGCTTTCAGAGTGAGAAAGATGTTTCCTTGGGTTGTAAGAAAAATGGGAGGGTGTTGAAGAGTAATTCCATGAAGGATTGGTGGTGGAAGCAAGACATTGAATCAGCAGCAGGGGCAACATCTCCCATGGGTGAGAATAAGAAAGTGAAGGATTATGTAATGGAATGGCTTGGAAAAGAGATAAGCAAAGAGAGACCTAAAAGTGACTGGGTTGCAGCAGAATCAGCAGCTGCATCTAGTAGTGTGGCAACAATGGAAAAAACAGAGAAAAAGAAGGGCAAGAGGCGCTTGGAATGGTGGAGGTCAATGGATGAGGAAGGCATTAATCCTAAAACTTTGAAGAAGGAGAAGAGAAGGCCTGCGAGAGAATGGTGGAAGGAGGAGTACTGTGAGGAGCTTGCAAAGAAGAAGAAGAAAAAGAAGAAACAGCAGCAAAAGAGGAATGGGATAAACAGTGATGATGATTGGTGGGCAAGAGACCCTGAGGAAATATATGGAGAGAGGAAGAAGGCCAAAACACGAAAAAACAGTCGTGGTAATAACATAGATTCATGGTTAGATGGATTCAGTGGTGAATTGTTCAGAGCTAGAAAGAACAGCCATGATTCTGCAGCAAGCTGGGAAATTCCCAAGAGTGGTGTTAGTAGCACACCAAGCATGAGAGGAACAGTTTGTTATGTTGCTCCTGAATATGGTTTTGGTGATGAGTTATCAGAGAAGTGTGATGTATATAGTTTTGGAGTATTATTACTTGTTATAGTTTCCGGGCGACGCCCACTTCAAGTGACTGGTTCGCCATTATCGGAGTTTCATAAAGCGAATCTACTGTCATGGGCACGCCATTGTGCGCGCAATGGGAAGCTACTTGATCTGGTTGATCAGTCTATTAAGTCATTAGATAAAGATCAAGCTCTTCTCTGCATCACAATTGCTCTTCTTTGTTTGCTCAAGACACCTTCCCGCCGTCCTTCAATGAAAGAGATTGTGGGAATGCTTACTGGTGAGCTTGATCCTCCACAATTGCCAGTTGAGTATTCACCATCAACACCGACTCGATTCCGAGCCAAGGCTCGCAAAAAGGGTCCCTGA 2091 0.483 MLSRKFSTSLPNPNPPSAFPPNQPNPTSKSHKSHHLLPPLVASTASICSFFLIFLLCFRRRLSRKKPTTPSSSSSSSSPPPKPPFHFSYSLLRRATSSFSTRLGHGGFGPVFSGTLPQTHQPIAVKLMDSASLQGEREFHNELFFASRLKSHYVVPAIGFSCDRNRRRFLVVYELMQHGNLQDALLHRRCPEMLEWERRFKVVVDVAKGIQYLHHSCDPPVIHGDIKPSNVLLDCSLSAKIGDFGLARLKSEPQVEIGVLGSEGFEMKKGKEEELESNGGSVVEETQSVITVDDGSLAADQSPEGFVRIPISEPSPEPEPVEVTSPLEANFDKVSFQSEKDVSLGCKKNGRVLKSNSMKDWWWKQDIESAAGATSPMGENKKVKDYVMEWLGKEISKERPKSDWVAAESAAASSSVATMEKTEKKKGKRRLEWWRSMDEEGINPKTLKKEKRRPAREWWKEEYCEELAKKKKKKKKQQQKRNGINSDDDWWARDPEEIYGERKKAKTRKNSRGNNIDSWLDGFSGELFRARKNSHDSAASWEIPKSGVSSTPSMRGTVCYVAPEYGFGDELSEKCDVYSFGVLLLVIVSGRRPLQVTGSPLSEFHKANLLSWARHCARNGKLLDLVDQSIKSLDKDQALLCITIALLCLLKTPSRRPSMKEIVGMLTGELDPPQLPVEYSPSTPTRFRAKARKKGP 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2424 696 Coils Coil 460 480 - -
Mibi02g2424 696 FunFam Os07g0541700 protein 176 258 - -
Mibi02g2424 696 MobiDBLite consensus disorder prediction 1 33 - -
Mibi02g2424 696 MobiDBLite consensus disorder prediction 469 488 - -
Mibi02g2424 696 PANTHER OS07G0586332 PROTEIN 17 694 IPR044576 -
Mibi02g2424 696 ProSiteProfiles Protein kinase domain profile. 97 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2424 696 Gene3D Transferase(Phosphotransferase) domain 1 176 268 - -
Mibi02g2424 696 Gene3D Transferase(Phosphotransferase) domain 1 529 672 - -
Mibi02g2424 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Mibi02g2424 696 MobiDBLite consensus disorder prediction 671 696 - -
Mibi02g2424 696 Pfam Protein tyrosine and serine/threonine kinase 550 665 IPR001245 GO:0004672|GO:0006468
Mibi02g2424 696 Pfam Protein tyrosine and serine/threonine kinase 99 250 IPR001245 GO:0004672|GO:0006468
Mibi02g2424 696 SMART serkin_6 97 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2424 696 SUPERFAMILY Protein kinase-like (PK-like) 71 684 IPR011009 -
Mibi02g2424 696 Gene3D Phosphorylase Kinase; domain 1 85 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2424 Mibi-ChrMibi02 28884326 28886416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2424 545 667 Receptor kinase-like Gene Family AT3G58690 32.031 8.41e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Mibi02g2424 PK_Tyr_Ser-Thr 1.4e-25 CL0016