Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2395 ATGGAAGAGAAAGATAGTTTCTTCTCTGGTCTTACCGTGAAGGCAAACGATGCTCCGAGAAGTGAAAACTACGGACTATTTAGTGGGCCCACAGGGGCATCGCCGGCGCCTACATCGGCTCCGATTTCATCTCCGGCTCCGGTATCAGCGCCGGAGCCGGTAAGTGTGGCGGCGGCGGCGACGACTGGGAGTACGGATGTGGTGAAGAAGAAAAGAGGGAGGCCTAGGAAGTATGGTCCAGATGGGAAATTAGCGTTGGCGTTATCGCCGATGCCGATTTCGTCTTCGATTCCGTTGACTGGGGATTTCTCACTGTGGAAAAGGGGGAGAGGGCGGCCGGTTGAATCGGTCAAGAAGTCTTTCAAGTGCGATTTTGAAAGTCCTGGAGGACCAGGTGATGGGATTGCGTACTCAGTTGGAGCCAATTTCACTCCTCATGTGCTTACTGTTAATGCTGGCGAGGATGTTAATATGAAGGTCATGTCCTTCTCTCAACAGGGATCTCGTGCCATTTGTATTCTTTCTGCAAATGGAACAATCTCAAATGTAACACTGCGGCAACCAACTTCTTCTGGGGGTACCTTAACATATGAGGGGCGATTTGAGATTCTTTCTTTGTCTGGTTCGTATATGCCTTCTGAGAATGGTGTGACAAGAAGTAGATCTGGTGGGATGAGTGTCTCTTTGGCAGGTCCAGATGGTCGAGTCGTGGGAGGCGGCCTTGCTGGTCTGTTGGTAGCAGCAGGTCCTGTGCAGGTTGTTGTGGGAAGTTTTCTTCCTGGCCACCAGCAGATGCAGAAACCGAAGAAGCAAAAGACGAATCATTTTACACCCGTTTCATCTGGGCATTACAATCCCATCCCAGTTGATGAAATAAAAATCAGCTTCGGCGGAGTAAAGCCTATTATGACTCCTGCTGCATTTCAAGCTGACCACAATAACAACAACATGGGTTCTTTTAACAACATCCAGGGCTCTAGCAACTCGTCTGCTGATGATGCTGATGACGACGACGAAGATGATGACATAGCACTTTATCCTGAAAAGGACTCTAACCCCGGCCAAACAAATGCTGGAGTCGCCTGCTAA 1089 0.4949 MEEKDSFFSGLTVKANDAPRSENYGLFSGPTGASPAPTSAPISSPAPVSAPEPVSVAAAATTGSTDVVKKKRGRPRKYGPDGKLALALSPMPISSSIPLTGDFSLWKRGRGRPVESVKKSFKCDFESPGGPGDGIAYSVGANFTPHVLTVNAGEDVNMKVMSFSQQGSRAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSYMPSENGVTRSRSGGMSVSLAGPDGRVVGGGLAGLLVAAGPVQVVVGSFLPGHQQMQKPKKQKTNHFTPVSSGHYNPIPVDEIKISFGGVKPIMTPAAFQADHNNNNMGSFNNIQGSSNSSADDADDDDEDDDIALYPEKDSNPGQTNAGVAC 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2395 362 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 39 330 IPR039605 GO:0003680
Mibi02g2395 362 MobiDBLite consensus disorder prediction 263 283 - -
Mibi02g2395 362 MobiDBLite consensus disorder prediction 331 345 - -
Mibi02g2395 362 Pfam Plants and Prokaryotes Conserved (PCC) domain 145 258 IPR005175 -
Mibi02g2395 362 MobiDBLite consensus disorder prediction 1 83 - -
Mibi02g2395 362 MobiDBLite consensus disorder prediction 313 330 - -
Mibi02g2395 362 MobiDBLite consensus disorder prediction 313 362 - -
Mibi02g2395 362 ProSiteProfiles PPC domain profile profile. 140 279 IPR005175 -
Mibi02g2395 362 MobiDBLite consensus disorder prediction 264 281 - -
Mibi02g2395 362 FunFam AT-hook motif nuclear-localized protein 1-like 145 276 - -
Mibi02g2395 362 CDD DUF296 144 258 IPR005175 -
Mibi02g2395 362 SUPERFAMILY AF0104/ALDC/Ptd012-like 142 264 - -
Mibi02g2395 362 SMART AT_hook_2 107 119 IPR017956 GO:0003677
Mibi02g2395 362 SMART AT_hook_2 69 81 IPR017956 GO:0003677
Mibi02g2395 362 Gene3D - 145 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2395 Mibi-ChrMibi02 27905450 27909372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2395 49 306 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 58.801 3.38e-91 277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g2395 02 27905450 27909372 Mibi02g2395 02 27905450 27909372 ECH