Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2387 ATGGGGTTTTCAGTTCTTCCCTTTATTCTCCTCTCTCTCATGTTCTTTCTCTCTCACCCAACATGGGTCTCTGGAAATACAGAGCTCAGAGCTCTAATGGACATGAAAGCTTCTCTTGACCCAGAAAGCCGTTACCTTTCTTCTTGGACTCTTAATGGGAATCCATGTGATGGTTCTTTTGAAGGAGTGGCTTGCAATGAGAATGGTCAAGTGGCTAACATTTCCTTGCAGGGGAAAGGCCTTTCTGGTAAACTCTCGTCCGCCATTGGTGGCCTCAAGCACTTAACAGGGCTTTACTTGCATTATAACTCCCTCTATGGTGAGATACCCAAAGAAATCGCCAACTTGGCTGAGCTCACTGATTTGTACTTGAATGTGAATCACTTCACTGGGGAAATCCCAACTGAGATCGGCAGAATGGAGAACTTGCAAGTTTTGCAGCTTTGCTATAATCAATTGAAGGGAAGTATACCTACTCAGCTTGGTGATTTGAAGAAACTCAGTGTTCTTGCTCTGCAGTCAAATCAATTAACTGGTGCCATCCCTGCTAGTTTAGGCAACTTGGGAATGTTAACGAGGCTCGACTTGAGCTCAAATCACCTATTTGGCTCAATCCCCTCCAAATTAGCCGATGCGTCTTCTCTGCAAGTTCTTGATGTTCGCAACAATACTCTCTCTGGGAATGTACCACCTGCTTTGAAGAAGCTTGAAGATGGATTCTTGTATGAATACAACCTGGGATTATGTGGGGTTGGGTTTTCATCCTTGAAGACTTGCAGTGCAACTGATCATGTTGATCCTAATAGACTTGATCCGTATGGAGCTGGTATTGATGGTCATTCAACAAGGGACATTCCGGAAACTGCGAATGTTCAGTTGCCAGCCTGCAATGGAACTCGGTGTCAAAAGTCATCGAAATCCAAACAAACAACAACAACATCTGTAACTGTTGGCATCATTGTGATTGCCATGGCAGTTTCAGCAGTTGGCATCCTAACTTTTGTACATTATCGCCGGAGAAAACAAAAGCTTGGAAACTCCTATGATGTCTCTGATAGCCGTCTAAGTACTGATCAAGCTAAGGCTGTGATTTACAGGAAAAGTGGCTCTCCTCTTATCAGCCTTGAATATTCCAATGGATGGGACCCTTTGGCTGATAGCAGGAACTTCAATGGGGATAGCCAAGACATGTTCCAGAGCTTTAGGTTCAATTTGGAAGAAGTTGAAACTGCGACTCAGTATTTCTCAGACTCAAATATGTTAGGAAAGAGTAACTTCAGTGCAACATATAAAGGAGTGTTAAGAGATGGGTCTGTGGTTGCTGTGAAGAGCATAAGCAAAAGTAGTTGCAAGTCTGATGAAGCTGAGTTTTTGAAGGGACTCAACATTTTGACATCACTTAGGAATGAGAATCTTGTGAGGCTTAGAGGTTTTTGTTGTTCTAGGGGACGAGGCGAGTGCTTTCTTGTTTATGATTTTGTTCCAAATGGAAATCTTTCAAGCTACCTTGATGTCAAAGAAGGTGATGCACATGTCCTTGAATGGTCCACCAGAGTTTCTGTTGTCAAAGGGATTGCTAAAGGTATTGCATATTTACATGCACACAAAGCCAACAAACCTGCGCTTGTTCACCAAAGCATCTCAGCTGAGAAAGTGCTCATTGATCAGCGATTCAATCCACTGCTTGTGGATTCTGGCCTCTGCAAGATCCTCACCAATGACATTGTCTTCTCAGGCCTCAAGGCAAGTGCAGCGAAGGGCTATCTAGCTCCTGAGTACACGACCACTGGTCGGTTCACTGAGAAAAGTGATGTGTATGCTTTTGGAGTGCTTCTTTTGCAGATCCTCTCTGGGAAGCAGACGATCACAAGCACAATGCGCCTTTTAGCAGAATCTTCGAGGTTTCTAGAAGTTATGGACCCGAATCTGCACGGAAAGTTCTTTGAATTCGAGGCGGCTAAGTTGTTGAAGATGGCTCTGGTTTGTTCCCATGAGTCTGCTTTTGAGAGGCCATCCATGGAAGCCATTGTTCAAGAACTGAACAATTGTAGTAGCTGCCTGTGA 2064 0.4399 MGFSVLPFILLSLMFFLSHPTWVSGNTELRALMDMKASLDPESRYLSSWTLNGNPCDGSFEGVACNENGQVANISLQGKGLSGKLSSAIGGLKHLTGLYLHYNSLYGEIPKEIANLAELTDLYLNVNHFTGEIPTEIGRMENLQVLQLCYNQLKGSIPTQLGDLKKLSVLALQSNQLTGAIPASLGNLGMLTRLDLSSNHLFGSIPSKLADASSLQVLDVRNNTLSGNVPPALKKLEDGFLYEYNLGLCGVGFSSLKTCSATDHVDPNRLDPYGAGIDGHSTRDIPETANVQLPACNGTRCQKSSKSKQTTTTSVTVGIIVIAMAVSAVGILTFVHYRRRKQKLGNSYDVSDSRLSTDQAKAVIYRKSGSPLISLEYSNGWDPLADSRNFNGDSQDMFQSFRFNLEEVETATQYFSDSNMLGKSNFSATYKGVLRDGSVVAVKSISKSSCKSDEAEFLKGLNILTSLRNENLVRLRGFCCSRGRGECFLVYDFVPNGNLSSYLDVKEGDAHVLEWSTRVSVVKGIAKGIAYLHAHKANKPALVHQSISAEKVLIDQRFNPLLVDSGLCKILTNDIVFSGLKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLLQILSGKQTITSTMRLLAESSRFLEVMDPNLHGKFFEFEAAKLLKMALVCSHESAFERPSMEAIVQELNNCSSCL 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2387 687 Gene3D Ribonuclease Inhibitor 142 252 IPR032675 -
Mibi02g2387 687 Gene3D Phosphorylase Kinase; domain 1 385 493 - -
Mibi02g2387 687 Pfam Protein tyrosine and serine/threonine kinase 419 680 IPR001245 GO:0004672|GO:0006468
Mibi02g2387 687 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 74 682 - -
Mibi02g2387 687 FunFam Leucine-rich repeat receptor-like kinase 27 136 - -
Mibi02g2387 687 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
Mibi02g2387 687 FunFam Protein NSP-INTERACTING KINASE 2 138 260 - -
Mibi02g2387 687 SUPERFAMILY Protein kinase-like (PK-like) 391 681 IPR011009 -
Mibi02g2387 687 SUPERFAMILY L domain-like 28 236 - -
Mibi02g2387 687 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Mibi02g2387 687 Gene3D Transferase(Phosphotransferase) domain 1 494 686 - -
Mibi02g2387 687 ProSiteProfiles Protein kinase domain profile. 415 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2387 687 FunFam Protein NSP-INTERACTING KINASE 2 494 684 - -
Mibi02g2387 687 FunFam Protein NSP-INTERACTING KINASE 2 386 493 - -
Mibi02g2387 687 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2387 Mibi-ChrMibi02 27725539 27729017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2387 9 528 Miscellaneous Gene Families AT4G22730 55.577 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Mibi02g2387 PK_Tyr_Ser-Thr 1.4e-35 CL0016