Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2374 ATGGTCTTAGCATGTATTGAGATCAAACCTGATCCCAACACTTTTCGGTTTTTATCAAGCGACTCCACCGGGGGAAAGGCCAGCATGCCGGCCATGAAGAAGAATTCTGAGCAAACTCCGTTAGGTTTTGTATTCAACAAGTTGGTGGATGAGATAGGAGATCCTGTTGATTTTGAACTTCCAGATTGGCTCAATAAGTGGAAGGCAGTGCCATACGTCTCTATAAAGCGCAACATATATGTTACAAAGAAGGTAAAGAGAAGACTTGATGATGATGGCATATTCTGTTCTTGTACTCCTTCCCCTGGGTCTTCTAGTATTTGCGGTAAATACTGTCACTGTGGAATGCTTATGTCTAGCTGCTCTTCAGGCTGTAAATGTGGGAGTTCTTGCCTCAATAAACCATTTCAGCATCGCCCTACAAAAAAGTTGAAATTGGTTCAGACTGAGAAATGTGGTTCTGGAATTGTGGCGGATGAAGATATCAAGCGAGGGGACTTTGTCATTGAATATGTTGGAGAAGTCATTGATGACAAAACTTGTGAAGAAAGGCTTTGGAATATGAAACATCGGGGGGAGACGAACTTCTACTTATGTGAAATTAACAGAGATATGGTGATTGATGCAACATATAAGGGGAACAAGTCAAGATATATAAATCATAGTTGCTGCCCCAATACGGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATTTTTGCAACTAGTGACATAAGGAAGGGCGAGCATCTTACTTACGATTATCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGCTGAATGCAGGCGTAAGTTGGGGGTACGACCTACCAAGCCTAAAACATCATCAGATGCTGCACTAAAATTAGTTGCTTATCAGGTTTATCAGAATGGAGGTTTGCATATTGGACATTCTCATGCTATCGGTGTACCAAAGTACTCGCACAATTGTATTGGAGAAGTTATAAGGATGAATCACCCCACAAAAGAGAGGTGGTGTTTTGGGATTATAAAGCGGTTTGATAAATATTCTCAAAAACACACTATCATGTCTGAAGATGGTGATGTTGACTTTATTGACTTGTCAGAAGTAGATTGGGAAGTTGTGAGATTGTGA 1140 0.407 MVLACIEIKPDPNTFRFLSSDSTGGKASMPAMKKNSEQTPLGFVFNKLVDEIGDPVDFELPDWLNKWKAVPYVSIKRNIYVTKKVKRRLDDDGIFCSCTPSPGSSSICGKYCHCGMLMSSCSSGCKCGSSCLNKPFQHRPTKKLKLVQTEKCGSGIVADEDIKRGDFVIEYVGEVIDDKTCEERLWNMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATSDIRKGEHLTYDYQFVQFGADQDCHCGAAECRRKLGVRPTKPKTSSDAALKLVAYQVYQNGGLHIGHSHAIGVPKYSHNCIGEVIRMNHPTKERWCFGIIKRFDKYSQKHTIMSEDGDVDFIDLSEVDWEVVRL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2374 379 SMART shorttest3 91 141 IPR006560 GO:0005634|GO:0018024
Mibi02g2374 379 FunFam Histone-lysine N-methyltransferase 58 297 - -
Mibi02g2374 379 SUPERFAMILY SET domain 67 277 IPR046341 -
Mibi02g2374 379 Gene3D SET domain 63 298 IPR046341 -
Mibi02g2374 379 SMART set_7 142 265 IPR001214 GO:0005515
Mibi02g2374 379 ProSiteProfiles SET domain profile. 142 259 IPR001214 GO:0005515
Mibi02g2374 379 ProSiteProfiles AWS domain profile. 91 140 IPR006560 GO:0005634|GO:0018024
Mibi02g2374 379 SMART PostSET_3 265 281 IPR003616 -
Mibi02g2374 379 ProSiteProfiles Post-SET domain profile. 265 281 IPR003616 -
Mibi02g2374 379 PANTHER SET DOMAIN PROTEINS 56 297 - -
Mibi02g2374 379 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 65 333 IPR025787 -
Mibi02g2374 379 CDD SET_ASHR3-like 143 281 - -
Mibi02g2374 379 Pfam SET domain 153 258 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2374 Mibi-ChrMibi02 27541178 27551344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2374 115 277 C2H2 Transcription Factor Family AT2G23740 35.519 7.66e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi02g2374 SET 1e-18 No_clan