Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2370 ATGGAGTCTAGAAATGTTGATGTTGATGAAAAGAAGCCAAACATAATGGGGGAGATTGGCCCAGAGAAGAAGGAGAAGAAAAAGAAGATAATAATAAGGTACAGAGAATGCATGAAGAACCATGCAGCTTCAATAGGAGGGAATGCAAGAGATGGATGTGGCGAATTCATGGCTTCTTCAGGAGATGACTCTCTCAACTGCTCTGCCTGCAAATGCCACAGAAACTTCCACAGAAAACTCTTTGAATCTGAAGATTCTGATCATGATACCCCTTCTTCTTCTCCTTCTCCATATTATGATTTTCATCACCATCTTCCTTCAAAGATGGTGCTTTCAAATTATAATATTGATGTTGCTGCTGGTGATCATCATCATGAGGTCATGAAACCCTTATTGACCCATGATTTGTGCCTCACTAGGTATAATAGTAATAATAATAAAAGTGGTGGGTCAAATGGTTCTTCAGATGATCATGATGAGTGTGATGAAAGAAAGAGGGTGAAGATGATGAAGAAGAGGTTCAGGACAAAGTTCAGTGAGGAGCAGAAGGAGAAGATGCTGGGATTTGCAGAGAAGGTTGGGTGGAGGATGCAGAAGCTGGATCAATCCATGGTTCAACAGTTTTGTGAAGAAGCTGGCATCAGCAGAAGAGTCCTCAAAGTTTGGATGCACAATAACAAGAACTCCTTTGCCAAGAGAAACCACCTCATTTCTACCAGCTGA 723 0.4122 MESRNVDVDEKKPNIMGEIGPEKKEKKKKIIIRYRECMKNHAASIGGNARDGCGEFMASSGDDSLNCSACKCHRNFHRKLFESEDSDHDTPSSSPSPYYDFHHHLPSKMVLSNYNIDVAAGDHHHEVMKPLLTHDLCLTRYNSNNNKSGGSNGSSDDHDECDERKRVKMMKKRFRTKFSEEQKEKMLGFAEKVGWRMQKLDQSMVQQFCEEAGISRRVLKVWMHNNKNSFAKRNHLISTS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2370 240 Pfam ZF-HD protein dimerisation region 32 79 IPR006456 -
Mibi02g2370 240 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 171 228 IPR006455 -
Mibi02g2370 240 Gene3D - 154 232 - -
Mibi02g2370 240 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 33 79 IPR006456 -
Mibi02g2370 240 FunFam Zinc-finger homeodomain protein 2 158 232 - -
Mibi02g2370 240 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 22 229 - -
Mibi02g2370 240 SUPERFAMILY Homeodomain-like 167 232 IPR009057 -
Mibi02g2370 240 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 34 80 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2370 Mibi-ChrMibi02 27502942 27503664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2370 28 236 ZF-HD Transcription Factor Family AT1G14440 47.442 6.34e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mibi02g2370 ZF-HD_dimer 2.5e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g2370 02 27502942 27503664 Mibi02g2370 02 27502942 27503664 ECH