Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2368 ATGTTCATAAATCATAATCATCATTCTACTCTCTACCTCTCGCCGCCTCTCGCCTTCCTTTGTTCTTCAGTCCCTAACACTTCGCTTCATGGCCACCTCCAGGTAAATGGTATTACGTCCCTGCGGATTAGGGCATTCAAGCGATGGATGGCATCAAGGGGTTTCATAATCAGTGATGCCCTTGATTTCGTTGACCATCCTGAAAATGGGGTTGCTGTGACAGCTTTGTGTGAATTGAAGGAAGGCGATGTTGTGGCCAAAATACCGAAGGATGCTTGCCTGACGGTTAAGACTAGTGGGGCCAGTCAAATGATTGAAGACTCTGGTTTGGATGGTAATCTGGGGTTAGCTGTGGCTATAATGTACGAGAGAAGCTTGGGTGAGAAGTCACCTTGGGCTGGCTACCTTCAGATTTTGCCTCACCAAGAGTGCCTTCCTTTAATGTGGACTCTGGATGAAGTGAATGAGTTTTTGGTTGGGACTGAGCTACACAAGACAGTGCAAGAGGATAAAGCTCTTATGTATGGGGACTGGAAAGAGAACATTCTGCCCGCCTTGGAATTTTCGCCTTCAAAGCTTAACCCGAAATCTTTTGGTGTAGAAGAATATTTTGCTGCGAGAAGTCTTATTGCTTCGCGGTCTTTTGAGATAGATGATTACCATGGCTCTGGCATGGTTCCCTTGGCAGACCTATTCAATCATAAAACAGATGCTGAGGATGTTCATTTCACTGCTGTGCCCCATGAATCTGAAGATGATATTGAGTGTGTAACTGATGAAGAAGAATTGGCTAAGAATTCTTCTATGGATGAGACTGAGTTGGATACTGCTTTTATCGGGAAACACAGTGGGAGCAATTTGGAGTCATCCTCGGTTGTGGGAGATGATCCTTCAATGTTGGAGATGATTATGATAAAAGATGTTAGTGTTGGAGCTGAGGTATTTAACACTTATGGGTCAATGGGTAACGCTGCTTTACTTCACAGATATGGATTCACTGAGCAAGACAACTCCTATGATATCGTGAACATTGATTTGGAACTGGTTCTTCAGTGGTGTTCTTCTTTATTTTCAGCTAGATACACTCGAGCAAGAGTTTCTCTCTGGAGAAGGCTGGGCTATTCTGCATGTGTCAGCCAAGACTCTGAATATTTTGAGATATCATCTGATGGAGAACCACAGACTGAACTCCTGATTCTTTTATACATCATGTTATTATCTGGAGATGCTTACCTCAAGTTAGACTTGTCGGTATATGTGGCGGGAAATATTCATGAAACAAGTGAAGCTTCTCTTTCCGGAGATTGCGATATATTGACAAATAAAGCTTCTGATATGAGTAAGGAATTTTTGCTAACTAGAAAAGTTTGTGATGCTTTGTTGGCTGTTGCTGATATGCGTGAAAGTCTCTATGGTCTGAACTCAATGGAAGATGATATTGAGGCATTAGGGAGGTGTGACTGTGTTAGAGAAAGGAAGCTGTTTCATTCTTTGGTGCTGCGCATTAGTGAAAGGAAAATCCTTGAAAAGCTCAGAAATTATGCTGCCAAGCCAATTGGAATTGGTAAGCGAAATTCTGTAAGGAAGAAATTGAAAAGCAAAAAATAG 1608 0.4229 MFINHNHHSTLYLSPPLAFLCSSVPNTSLHGHLQVNGITSLRIRAFKRWMASRGFIISDALDFVDHPENGVAVTALCELKEGDVVAKIPKDACLTVKTSGASQMIEDSGLDGNLGLAVAIMYERSLGEKSPWAGYLQILPHQECLPLMWTLDEVNEFLVGTELHKTVQEDKALMYGDWKENILPALEFSPSKLNPKSFGVEEYFAARSLIASRSFEIDDYHGSGMVPLADLFNHKTDAEDVHFTAVPHESEDDIECVTDEEELAKNSSMDETELDTAFIGKHSGSNLESSSVVGDDPSMLEMIMIKDVSVGAEVFNTYGSMGNAALLHRYGFTEQDNSYDIVNIDLELVLQWCSSLFSARYTRARVSLWRRLGYSACVSQDSEYFEISSDGEPQTELLILLYIMLLSGDAYLKLDLSVYVAGNIHETSEASLSGDCDILTNKASDMSKEFLLTRKVCDALLAVADMRESLYGLNSMEDDIEALGRCDCVRERKLFHSLVLRISERKILEKLRNYAAKPIGIGKRNSVRKKLKSKK 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2368 535 Gene3D set domain protein methyltransferase, domain 1 42 269 - -
Mibi02g2368 535 Gene3D set domain protein methyltransferase, domain 1 275 333 - -
Mibi02g2368 535 ProSiteProfiles SET domain profile. 59 319 IPR001214 GO:0005515
Mibi02g2368 535 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 42 461 - -
Mibi02g2368 535 Pfam SET domain 70 319 IPR001214 GO:0005515
Mibi02g2368 535 CDD SET_LSMT 60 333 - -
Mibi02g2368 535 PIRSF RMS1_SET 32 518 IPR011383 GO:0016279|GO:0018026
Mibi02g2368 535 SUPERFAMILY SET domain 42 338 IPR046341 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2368 39 534 NAC Transcription Factor Family AT3G56570 55.514 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi02g2368 SET 2.6e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g2368 02 27483222 27488529 Mibi02g2368 02 27483222 27488529 ECH