LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi02g2364	ATGGAGAACGAAGATGATGTGAATTATGGGGACAATGTGAATGACATAGAAAATGAAAGTCCATTGGATGGGAATGGTAATAGGAGGTACTGGTCAGAGGTTTTTGAAAGAAACAAGTCATATACAGAGCCACTTCTGGTGAAGAGGACTAACACCACCTCTCAGATGGCCATAGTTGGTGCCAACCTCAGCCCCATTGAAAGCCTTGATTATGAGATGTTTGAGAATGAAATATTTAAGCAGGACTGGAGATCAAGGGGCAAGATTCAGATTTTCCAATATGTATTACTTAAATGGGGATTTGCTGCTCTCATTGGATTAGGCACTGGGCTACTTGGTTTCTTCAATAATATTGCCGTTGAGAATATTGCTGGTTTCAAGCTGCTTCTGGTATCTGACCTCATGTCTCAACACAGATATATTCTAGCATTTGTAGCATTAGCTGGTTGCAATATATGTTTAGCAACAGCGGCTGCATCTCTTTGTGCTTTCATTGCTCCAGCAGCTGCAGGCTCTGGTATTCCTGAGGTGAAAGCCTATCTTAATGGCATTGATGCTCACAGTATACTGGCCCCAAGCACTCTTTTTGTGAAGGTTTTTGGTTCCATCCTTGGAGTTTCTGCTGGATTTGTGGTGGGCAAAGAGGGGCCTATGGTACACACAGGTGCATGCATTGCTTCCTTGTTAGGGCAGGGTGGATCCCGCAAGTACCACTTAACCTGGACCTGGCTAAGGTATTTCAAAAATGATCGGGACCGGCGAGACATGATTACTTGTGGTGCTGCAGCTGGTGTTGCTGCTGCATTTCGTGCTCCAGTAGGTGGTGTTCTCTTTGCCCTTGAAGAGGCAGCTTCATGGTGGCGAAGTGCTCTCCTTTGGAGGACATTTTTCACTACAGCTGTGGTTGCTATTGTTTTGAGAGCCGGAATTCAGTACTGTGCGACAGGAAAATGTGGGCTATTTGGTGAAGGTGGTTTGATAATGTACGATGTCAGTGCAGCTGATGTAAGATACAGTGGTGCTGATATACTAGCAGTATTACTCCTAGGAACCTTTGGAGGCATTCTCGGAAGCATATACAATTTCTTTGTGGACAAGGTTGTTCGTACATATAGCATGCTGAATGAAAAAGGTCCAGGATTCAAAATTCTCATCGTTGTCACAATTGCTTTTTTGACTTCATGTTGCGCTTATGGCCTACCATGGTTGGCGACATGCATCCCATGTCCTGATGATCCGGCGGTGAGCTGCCCCACGGTTAATGAGTCTGGCAACTACAAGATTTTCCAATGTCCACCGGGACATTACAACGATCTCGCCTCTCTTTTTCTAAATACCAATGATGATGCCATTCGCAATCTAGTCAGCACCATGACATTCAGAGAATTCCACATCTCCAGTCTCTTTATCTTCTTTGTAACTATTTACATTCTTGGGGTAGTCACATATGGTATTGCTATTCCATCTGGGCTTTTCATTCCTGTGATATTGGCTGGTGCTGCTTATGGCCGGCTTGTAGGGAGACTATTTGAATCGATTTCAAAACTTGATGCTGGATTATACGCCCTCCTTGGAGCTGCCTCCTTCCTAGGTGGCACCATGAGGATGACAGTATCCCTTTGTGTTATATTGCTAGAACTTACCAATGATCTCTTGTTACTTCCTCTTGTGATGTTGGTCTTGTTAATCTCAAAAACTGTGGCTGATAGCTTCAACAAGGGTGTCTACGATCAAATACTGAAGATTAAAGGACTTCCATTTATGGAGGCCCATGCAGAACCTTATATGAGGAACTTAGTTGCCCGAGATGTTGTCTCTGGCCCACTAATCACTTTCTCTGGCATTGAAAAGGTGGGGAATATCCTACATGCTCTGAGAACCACAGGGCATAACGGGTTTCCTGTCATAGATGAACCACCATTCTCAGAAGCACCAGAATTGTGTGGGCTTGTTCTAAGGTCTCATCTTCTAGTGCTATTGAAGGGGAAGAACTTCTCAAAAGACAAGGTGGTTACGAGTCGAAACATCTTACAAAGACTTTCTGCACTAGATTTTGCAAAGCCAGGATCAGGGAAAGGAATTAAACTAGAGGATATAGATATTGATGATGAAGAAATGGATATGTACGTTGATCTCCACCCCATATCCAATGCATCGCCATATACGGTGGTTGAGACCATGTCTCTTGCTAAAGCCGCTATTCTTTTCCGCCAACTCGGTCTTAGGCACATGTGCGTGGTCCCGAAGAGTCAACATAGACCTCCAGTTGTTGGGATTCTGACACGTCATGACTTCATGGAGGAACATGTCCATGGACTTTACCCTAATATGAAACCTCGCAGGTGGACTGAGTGA	2355	0.4433	MENEDDVNYGDNVNDIENESPLDGNGNRRYWSEVFERNKSYTEPLLVKRTNTTSQMAIVGANLSPIESLDYEMFENEIFKQDWRSRGKIQIFQYVLLKWGFAALIGLGTGLLGFFNNIAVENIAGFKLLLVSDLMSQHRYILAFVALAGCNICLATAAASLCAFIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKVFGSILGVSAGFVVGKEGPMVHTGACIASLLGQGGSRKYHLTWTWLRYFKNDRDRRDMITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAIVLRAGIQYCATGKCGLFGEGGLIMYDVSAADVRYSGADILAVLLLGTFGGILGSIYNFFVDKVVRTYSMLNEKGPGFKILIVVTIAFLTSCCAYGLPWLATCIPCPDDPAVSCPTVNESGNYKIFQCPPGHYNDLASLFLNTNDDAIRNLVSTMTFREFHISSLFIFFVTIYILGVVTYGIAIPSGLFIPVILAGAAYGRLVGRLFESISKLDAGLYALLGAASFLGGTMRMTVSLCVILLELTNDLLLLPLVMLVLLISKTVADSFNKGVYDQILKIKGLPFMEAHAEPYMRNLVARDVVSGPLITFSGIEKVGNILHALRTTGHNGFPVIDEPPFSEAPELCGLVLRSHLLVLLKGKNFSKDKVVTSRNILQRLSALDFAKPGSGKGIKLEDIDIDDEEMDMYVDLHPISNASPYTVVETMSLAKAAILFRQLGLRHMCVVPKSQHRPPVVGILTRHDFMEEHVHGLYPNMKPRRWTE	784

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi02g2364	784	PANTHER	CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER	28	771	-	-
	Mibi02g2364	784	ProSiteProfiles	CBS domain profile.	715	776	IPR000644	-
	Mibi02g2364	784	CDD	ClC_6_like	67	588	-	-
	Mibi02g2364	784	PRINTS	Plant CLC chloride channel signature	439	455	IPR002251	GO:0005247\|GO:0006821\|GO:0016020
	Mibi02g2364	784	PRINTS	Plant CLC chloride channel signature	283	291	IPR002251	GO:0005247\|GO:0006821\|GO:0016020
	Mibi02g2364	784	PRINTS	Plant CLC chloride channel signature	72	80	IPR002251	GO:0005247\|GO:0006821\|GO:0016020
	Mibi02g2364	784	PRINTS	Plant CLC chloride channel signature	297	307	IPR002251	GO:0005247\|GO:0006821\|GO:0016020
	Mibi02g2364	784	PRINTS	Plant CLC chloride channel signature	315	322	IPR002251	GO:0005247\|GO:0006821\|GO:0016020
	Mibi02g2364	784	FunFam	Chloride channel ClC3	90	415	-	-
	Mibi02g2364	784	Gene3D	-	589	772	IPR046342	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi02g2364	Mibi-ChrMibi02	27431144	27436862	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi02g2364	5	781	Ion Channels	AT5G49890	71.245	0.0	1105

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