Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2361 ATGGATCCACCAGTACTCTGCGCTAATGGATGTGGCTTCTTCGGCTCTCACGATACACATAACATGTGCTCCAAGTGTTATAGGGATCATGTGCTTAAGCTCAACCAAAAGATATGTGAATCAATGACTTATCTCACTATATCGCAGCATTCTTCTTCATCTAAAGAACTATATCATCTAAACAGAGCTGATGATCACAGGAACGATGAGTTATATGAATCAATGAGAAATCTCGTTATATCTCATTCTTCTTCATCTAATGATCTAGATCATTTGAATATCGCTGATGAACATAAGAACGATGAGTCATCAAATATCAGCATGAATTTTGGGACTTTTACTTCCAAATCTGATGAATCTAAAGAGAAAAACAGGTGTAAGAGTTGCAACAAAAAAGTGGGACTACTAGGATTCAAATGCCAATGTGGAGACTTGTTTTGTGGGAGACATAGATACCCAGAAGAACATAAATGCACGATAGATTATAAGCAGATTAGTCGTGAGTTCATTAACAAACAAAATCCGCTTTGCAAAGCTGATAAAATATCAAGAGCTTAA 558 0.3638 MDPPVLCANGCGFFGSHDTHNMCSKCYRDHVLKLNQKICESMTYLTISQHSSSSKELYHLNRADDHRNDELYESMRNLVISHSSSSNDLDHLNIADEHKNDESSNISMNFGTFTSKSDESKEKNRCKSCNKKVGLLGFKCQCGDLFCGRHRYPEEHKCTIDYKQISREFINKQNPLCKADKISRA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2361 185 Pfam A20-like zinc finger 6 28 IPR002653 GO:0003677|GO:0008270
Mibi02g2361 185 Gene3D - 1 57 - -
Mibi02g2361 185 ProSiteProfiles Zinc finger AN1-type profile. 120 166 IPR000058 GO:0008270
Mibi02g2361 185 Pfam AN1-like Zinc finger 126 163 IPR000058 GO:0008270
Mibi02g2361 185 Gene3D - 97 181 IPR035896 -
Mibi02g2361 185 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 184 - -
Mibi02g2361 185 ProSiteProfiles Zinc finger A20-type profile. 1 35 IPR002653 GO:0003677|GO:0008270
Mibi02g2361 185 SMART A20_3 4 28 IPR002653 GO:0003677|GO:0008270
Mibi02g2361 185 FunFam Zinc finger AN1-type containing 6 97 181 - -
Mibi02g2361 185 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 45 - -
Mibi02g2361 185 SMART AN1_Zf_4 126 163 IPR000058 GO:0008270
Mibi02g2361 185 SUPERFAMILY AN1-like Zinc finger 114 180 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2361 Mibi-ChrMibi02 27380372 27380929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2361 6 184 C2H2 Transcription Factor Family AT3G52800 35.754 1.20e-26 98.2