Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2340 ATGATTGGTTGCATCATTATGAACTGTTTCCAACTTGTGGTTCTGTTGTTTCTGTCACTAAACATGATGGTACTTTCAGAGTTATTTCCAGATGAAAGAGCTTCTCTGTTGCTTCTGAGGGATTCCTTAACTTCTCCTTCTATTGATTTACATGGGAATTGGACAGGACCACCTTGTATAGACAACCTAAGTCAATGGAAAGGTATCACTTGTTTTAATTGGCATGTTGTTCAGATTGTTCTTGAAAGTTTTGAGCTTACAGGCCATTTGCCTCCTTCTTTCCCTCAGAACATAACATTCTTGACTCAGCTTAGTCTCAGAAACAATTCAATTTCTGGGACTCTTCCAAATCTCACCAACTTGATGTTCTTAGAACATGTTTTTCTTTCATATAATCGCTTCAATGAATCAATTCCATTGGAGTATGTTGGATTGCCTGGTCTTAAAGCATTGGAGCTGCAGGAGAATTATTTAGAGGGTCAAATCCCATCTTTTGATCAAGATTCTTTGATAATTTTCAATGTCTCCCATAATCATCTGGATGGACCAATTCCTCAAACTTCTGTGCTGCAGAAATTTCCAAAGAGCTCTTTTGATAATAATTCTGATCTCTGTGGGAAGCCATTGGATGTTTTGTGTCCTGCTCCTTCTCCAGAACCTTCTTGTGCACCAGCTCCAAGCCCAGAAGCACCTAAAGAAAACAAGAGACTTCCAGTATGGATTGTTGCTTTGCTTACTACAGCACCTGCACTGGTTTTTGTTCTGGTTATTATTGTCTTCTTCTTGTTCTGTAATAAAAGGGTTCAAGCAAAAGAAACAACCAGGAATGAATCTGCTGAAGGTTATGGTTTTGGAGCATGGGCAAAGAATATGATGTCCTATTCATTGAGCAATGAAGATCCTGAAAGGACAGGAAAATTGGAAATTTACAGTAAGGATTACCCAATTTTTGACTTGGATGATTTATTAAGGGCATCAGCAGAAATGCTAGGTAAGGGAAGCCTAGGCATCACATTTAAAGCAACACTTGAAACTGGTGCTGTTATTGCTGTGAAGCGACTTGATCAAATGAATAGCTTTGTCAAGAAGGAGTTATTCCTCCAGCATATGCAATTGCAAGCAAGGTTGAAGCATGAAAATCTGGTTGGAATCATCTCTTTCTATTACTCAGAGGAGCAAAAGCTGGTGGTTTATGAGTTTATCCCCAGTATATCTTTGTTTGAGCTACTTCATGATAGTAGAGTACTTAGAAGAACTCCACTTGATTGGTCCACAAGGCTGGCTATAATCAAAGACATAGCAAGAGGTCTAGCTTTCCTTCACCACTCTTTCCCTTCACATAAGGTTCCTCATGCCAACCTAAGAACATCCAATGTTCTCATTCATCAAGATGCTCAAGGCTACCATTCCAAGCTCACAGACTTTGGCTTCTTGCCGTTGCTTTCTGCAAAAAAATCTGCCGAAAAGCTAGCCATAAGCAAGTCACCTGAATTTGTCCAAAGCAAGAAGCTGACACAAAAAGCTGATGTATATTGCTTTGGAATCATAATTCTTGAGATCATAACTGGGAAAGTTCCAGGTGAAAGTCTTGGTGAGATTGAAGAAACAACAAATGATATTTCTGAATGGGTAAGAACAATTGTAAATAATGATTGGTCCACAGACATACTTGATTCAGAGATATTAGCAGCAAGAGAGGGGCATGGTGCTATGTTTGAGCTTACAGAGATAGCTCTACAGTGTACCGATATGACACCTGAGAGAAGGCCCAAAATGAATGAAGTTTTGGTGAGAATAGAAGACATAGAGCAAATGAAATCAGCGAATGAGTGA 1833 0.3923 MIGCIIMNCFQLVVLLFLSLNMMVLSELFPDERASLLLLRDSLTSPSIDLHGNWTGPPCIDNLSQWKGITCFNWHVVQIVLESFELTGHLPPSFPQNITFLTQLSLRNNSISGTLPNLTNLMFLEHVFLSYNRFNESIPLEYVGLPGLKALELQENYLEGQIPSFDQDSLIIFNVSHNHLDGPIPQTSVLQKFPKSSFDNNSDLCGKPLDVLCPAPSPEPSCAPAPSPEAPKENKRLPVWIVALLTTAPALVFVLVIIVFFLFCNKRVQAKETTRNESAEGYGFGAWAKNMMSYSLSNEDPERTGKLEIYSKDYPIFDLDDLLRASAEMLGKGSLGITFKATLETGAVIAVKRLDQMNSFVKKELFLQHMQLQARLKHENLVGIISFYYSEEQKLVVYEFIPSISLFELLHDSRVLRRTPLDWSTRLAIIKDIARGLAFLHHSFPSHKVPHANLRTSNVLIHQDAQGYHSKLTDFGFLPLLSAKKSAEKLAISKSPEFVQSKKLTQKADVYCFGIIILEIITGKVPGESLGEIEETTNDISEWVRTIVNNDWSTDILDSEILAAREGHGAMFELTEIALQCTDMTPERRPKMNEVLVRIEDIEQMKSANE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2340 610 ProSiteProfiles Protein kinase domain profile. 324 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2340 610 Gene3D Transferase(Phosphotransferase) domain 1 402 610 - -
Mibi02g2340 610 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 606 - -
Mibi02g2340 610 Pfam Protein kinase domain 328 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2340 610 ProSiteProfiles Leucine-rich repeat profile. 100 122 IPR001611 GO:0005515
Mibi02g2340 610 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Mibi02g2340 610 Gene3D Phosphorylase Kinase; domain 1 291 400 - -
Mibi02g2340 610 SUPERFAMILY Protein kinase-like (PK-like) 327 602 IPR011009 -
Mibi02g2340 610 SUPERFAMILY L domain-like 55 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2340 Mibi-ChrMibi02 27078602 27081186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2340 38 607 Receptor kinase-like Gene Family AT1G68400 33.227 3.87e-101 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi02g2340 Pkinase 1.6e-32 CL0016