Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2332 ATGGATTCGAAGACACTGGAAGAAGCGGGACAAAGCGCTTTGAATTTTAAGTGTGTGAAGATTCTTCACGGAGCTGACAGATCTATCGCTTGCCAGACTCCAGAGAAGACTAGTGAGCCCTTACTTAATAAAGCCAAGGAGGGATCCACCCAGCTTCCTGAAACATACAAGGCTTTAGCAGATTTATTTGATCATATGAGTTGTTCACTGAGGTTGCTTCGTCTTTGTAAAAAATCTACCACCTTTCAAAACATTTGTTCCCAGGTTGAAGTTCTAGCTAAGAGAAAATTCTTGTACACGGATCTTGCACAGATAAAGTATATACTTCCTGAAGCCATACACATAGAGAAGGTGTTAGTAAATGACAATAGAAGCTTGTGTATGAAGCCTGATTTGAAGATCACCTTGGTATATGAGGTTGTGCTTGGACACTCTTGTGAAAGTACTTATGTGGCACTGCGGAATCTTTTTGGTTCTAGGCTACTTGAGTTCTTCAATACGCATCCAGAGGATACTGATATTCCAGAAGCTACACTACCAGAGCCTTTTCAAACAGCTGATAGCTTGATTTATGAGGATTTGCCTGTAGATCCTTCAACAATACTCTCACCATCAACTGATCAAAATCAACATCTATCACAGGAATGCCAGCGTTATCCTCTTAGAAGTCATTTCTCAAGGAAGAATGTTGTGGTAGAGATAGAAAATAATGCCGTAGTAAGTCAAATTTCTCAGTCACATCATTCATCTGATTGCTTAGATAGTGAAGGAGGTGAAGGCGACAGTGACAATGATAGCTTAGATAATGAAGGAGGTGAAGGTGACAGTGACAGTGATTGCATAGATAATGAAGGAGGTGAAGGTGACAGTGAATGTCAGAAAAAATGTACTACTACATACTTTAAATCTGATCTGGATATGGAAAAAGAACAGAACAATGAATCATGTTCCATGGGATCACAATGCAGTGTTGTTAATACACCAATACGTCTGATTTGCTCTCCACAGTCTGTTCGTTGTGGTAGTTATGAAACCTCTTATCTCAAGATTGCCCCATCCACGGATGTATTAATGGCAGAGACACCTGCTCAGTCAACACCTAGAAGATCGGCGCCCAATTCTGATGTTAAACTTAAGCATATGACCGCCCAAAATTCAACTTCAAGCAATAAGCAAGTAAAAAGGGTTCTTTTTTCACATGAAGGGGATTATGATGTTGACAAGTTAGAATCAAGTAGAGATGCTTGTGATAACATCCCTAAAGTTAGTCAAGCATGCACTGAGGATTCTAATGTTTCTAATTCTACTCTATCCCAGAAGGTGGCTAAGTGCATTGATTGTTCTCGTGAGAATACGAATCAAATACAAGGTGGTTCAACAACCTGGCAGCAGAAGCCTTCATCGTTGCTTGGCCTTGTTGATGTGATATATTCTATATTTTGTTCCATCAAATGCTCTCCAATCACAAAAGAGGAACTCCTGCACAAGATAGTAATGAACAGTTTAGATTTTGTTGAGATGAGAGAAGCTGAAGAGCAGATTAATTTCCTTGAAAATGCAGCGCCAGGTTGGATCTACACGAAGTCGGGCCCTGGTGGAGGCACTATGTACTGTATTGAGGAGGGGTTAGATTTGGAGTCTGTTCGATCAAGGGTATCAAGCAATAGCATGAAGGCTCTGTGA 1683 0.4046 MDSKTLEEAGQSALNFKCVKILHGADRSIACQTPEKTSEPLLNKAKEGSTQLPETYKALADLFDHMSCSLRLLRLCKKSTTFQNICSQVEVLAKRKFLYTDLAQIKYILPEAIHIEKVLVNDNRSLCMKPDLKITLVYEVVLGHSCESTYVALRNLFGSRLLEFFNTHPEDTDIPEATLPEPFQTADSLIYEDLPVDPSTILSPSTDQNQHLSQECQRYPLRSHFSRKNVVVEIENNAVVSQISQSHHSSDCLDSEGGEGDSDNDSLDNEGGEGDSDSDCIDNEGGEGDSECQKKCTTTYFKSDLDMEKEQNNESCSMGSQCSVVNTPIRLICSPQSVRCGSYETSYLKIAPSTDVLMAETPAQSTPRRSAPNSDVKLKHMTAQNSTSSNKQVKRVLFSHEGDYDVDKLESSRDACDNIPKVSQACTEDSNVSNSTLSQKVAKCIDCSRENTNQIQGGSTTWQQKPSSLLGLVDVIYSIFCSIKCSPITKEELLHKIVMNSLDFVEMREAEEQINFLENAAPGWIYTKSGPGGGTMYCIEEGLDLESVRSRVSSNSMKAL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2332 560 SMART CDT1_2 52 181 IPR014939 -
Mibi02g2332 560 CDD Cdt1_m 34 182 IPR014939 -
Mibi02g2332 560 Pfam DNA replication factor CDT1 like 52 117 IPR014939 -
Mibi02g2332 560 MobiDBLite consensus disorder prediction 256 286 - -
Mibi02g2332 560 MobiDBLite consensus disorder prediction 243 291 - -
Mibi02g2332 560 Gene3D - 459 558 IPR038090 -
Mibi02g2332 560 SUPERFAMILY "Winged helix" DNA-binding domain 49 183 IPR036390 -
Mibi02g2332 560 PANTHER DNA REPLICATION FACTOR CDT1 41 553 IPR045173 GO:0003677|GO:0030174|GO:0071163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2332 Mibi-ChrMibi02 26932514 26937645 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2332 472 552 Core DNA Replication Machinery Family AT3G54710 35.802 2.32e-10 61.2