Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2286 ATGAAGACAAAGGAGCATATTCCGCCTCTTAATTTGAGAGAGCGACCTAAAAGTAAATGGGATGATGAAGACGTAGATGAAAATGACCTGAAGGAATCATGGGAGGATGAAGATGAACCTGCTCCGGCACGTGCACCACCTTCCATGAAACATACTGAAAAGGCTCCAAAAAAATCTTCTGAAAAAGCTACTGGCAAGAAGGACAAGAAAATTGTAATAGAAAAGGAAGAAACAGTGGATCTTCTGGTTGAAAAACTTCGTCAACAGAGACTGGTTGAAGAAGCAGATTATAAGACAACTAAAGAATTGTTTGGTAATAGGGATGATGTTGAAAAGAAGCTTGATAATTTTATTCCTACATCTGAGAATGATTTCTTGGAATATGCACAGCTTATTTCACATAAGTTTCGCCCTTTTGAGAAAAGCTACCATTACAAGAATTTATTGAAGACATTGATGAGGTTATCAATGTCTACTTTAAAAGGAGCAGAAGTAAAAGAGATTGCCTCATCTCTCAACGCCATTGCAAATGAGAAATTAAAAGCAGAAAAGGAAGCAAAAACCAGTAAAAAGAAGACAGGTGCCAAGAAAAAGCAACTACATCTTGACCAACCTGATGAGGATTTGGCTTTAGATCCATATAGTGTTCTTGATGATTACGCAGAGAAGGATTTTCCAAACATGAACCACAAAGCCGCCGTCTCTAAGGAGCTCAATGACAAGTTCTCCAAGATCTTAGAGGGTCTTCTTAAGCTGCCTGAAAATAAGGAATGTGCTGACTGCCGAAACAAGGCACCACGATGGGCTAGTGTGAATCTAGGAATTTTTATATGCATGCAATGTTCGGGAATTCACCGAAGTCTTGGAGTGCATATATCAAAGGTGCGGTCTACAACTTTGGATACATGGTTGCCAGAACAAGTCTCTTTCATGCAATTCATGGGTAATGAGAAGTCAAATGAGTATTGGGAGGCAGAACTACCGCCAAATTTTGATAGAATTGACTTCGGAATCGAGAAGTTTATTCATTTCAAGTATGTGGAGAAAAGGTGGGCTAAAATTGGTGGAGTAAATCCAGCTTCAAAGGCAGGTGAAATAATATGTAATCTGAATCTGAATGTGCCGCCACCTGGCCCCAAGGGTGGCTTTTCAAGGGCCAATAGGAGATTTTCTCTCGAGGAAAGCATTCTTACACGCCACATGGAACAGATCCTGCCTCCAGTGACAAGACATCGTGGGGGTTCTCTTGACATACCAAAAAGTACCACCTCTCCTCCGGTAAGGAGGCAGTGCCCATCAGTTGATTTTGACAAGTCCCCAGTCAACAATTTGAATGCTGACTTTTTTAGCATGTTTGGCGTCCATGGTGATAAGAAGGACTCTGTAACTGTACCTCCTACTAGCTGGACAACATTCGACTGTAAGACAATGATACTTTCATCTTACTTAATCTTTGATCTTCTCTTACTGCCTCGGATAATTGTATTGAGGCTGTTTATTACTTCAGCAGGAGATGAGTCAATATTGAAAGTTTACAGACTGTTCAGCTATTAG 1554 0.4048 MKTKEHIPPLNLRERPKSKWDDEDVDENDLKESWEDEDEPAPARAPPSMKHTEKAPKKSSEKATGKKDKKIVIEKEETVDLLVEKLRQQRLVEEADYKTTKELFGNRDDVEKKLDNFIPTSENDFLEYAQLISHKFRPFEKSYHYKNLLKTLMRLSMSTLKGAEVKEIASSLNAIANEKLKAEKEAKTSKKKTGAKKKQLHLDQPDEDLALDPYSVLDDYAEKDFPNMNHKAAVSKELNDKFSKILEGLLKLPENKECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPEQVSFMQFMGNEKSNEYWEAELPPNFDRIDFGIEKFIHFKYVEKRWAKIGGVNPASKAGEIICNLNLNVPPPGPKGGFSRANRRFSLEESILTRHMEQILPPVTRHRGGSLDIPKSTTSPPVRRQCPSVDFDKSPVNNLNADFFSMFGVHGDKKDSVTVPPTSWTTFDCKTMILSSYLIFDLLLLPRIIVLRLFITSAGDESILKVYRLFSY 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2286 517 ProSiteProfiles ARF GTPase-activating proteins domain profile. 243 364 IPR001164 GO:0005096
Mibi02g2286 517 Pfam Translation initiation factor eIF3 subunit 17 220 IPR013906 GO:0003743|GO:0005737|GO:0005852
Mibi02g2286 517 MobiDBLite consensus disorder prediction 37 69 - -
Mibi02g2286 517 SMART arf_gap_3 240 359 IPR001164 GO:0005096
Mibi02g2286 517 MobiDBLite consensus disorder prediction 1 69 - -
Mibi02g2286 517 PRINTS HIV Rev interacting protein signature 295 316 IPR001164 GO:0005096
Mibi02g2286 517 PRINTS HIV Rev interacting protein signature 255 274 IPR001164 GO:0005096
Mibi02g2286 517 PRINTS HIV Rev interacting protein signature 274 291 IPR001164 GO:0005096
Mibi02g2286 517 Gene3D Eukaryotic translation initiation factor 3 like domains 112 189 IPR023194 -
Mibi02g2286 517 Gene3D Arf GTPase activating protein 223 355 IPR038508 -
Mibi02g2286 517 CDD ArfGap 246 346 - -
Mibi02g2286 517 MobiDBLite consensus disorder prediction 1 24 - -
Mibi02g2286 517 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 228 430 IPR044520 GO:0005096
Mibi02g2286 517 Pfam Putative GTPase activating protein for Arf 244 353 IPR001164 GO:0005096
Mibi02g2286 517 Coils Coil 172 192 - -
Mibi02g2286 517 SUPERFAMILY ArfGap/RecO-like zinc finger 243 352 IPR037278 -
Mibi02g2286 517 FunFam stromal membrane-associated protein 1 isoform X1 228 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2286 Mibi-ChrMibi02 26075775 26088511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2286 229 328 C2H2 Transcription Factor Family AT4G05330 47.525 1.17e-24 103