Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2282 ATGGACACTTGTCGAATATCTAAAGCGAGTACAACACCTACCCCAACCCAAGCGCGTGTACGGAGTGAGTGGTGTGTGTGTGTGTGGTCTTTTGAAGGCTGGTGGCACCATACGATCACTGGTTTCTCTTCAGAAGAAGAAGAAGAAGCGGATTTTGCTGTCTTCATCATGGTGAGAAAGAAGAGAACTGAAGGTCCTAGTGGAGGTGAAAGCTCTGAGACTCATGAAAGTGGGGGAAGCGGAAGAGGATATCAGCGCCCTCCAGAAAGGAGTGCTCAAGGCCCACAACAGTCAGCTGGAGGACCCCAGGGAGGTAGAGGCTGGTATCCTCAAGGAGGGCGTGGTGGTGGTGGTGGTGGTTACGGTGGAGGTGGTGGAGGACGTGGTCGTGGGTCACCCCAACAGCAGTACAGTGGCCCACCTGATTATCAAGGCAGGGGTAGGGGAGGATCTTATCAACAGGGAGGTCGTGGTGGATATAGTGGTGGTCGGGGTGGTGCTGGCATTAGTGGACGTGGTGGGGGACCTTCTTATGGTGTTCCATCCCGACCAGAAGTACCCGAGCTGCACCAAGCAACCTCAGCTTCATATCAAGCTGGGGTGACTCCTCAGTCTACGATATCTGAGGCCAGTTCTGTTTCACAACCTTCGGAGATAACACAGTTAGAACAGCAAACTAAGCAGTTAACCATTCATCCAGAAGTTTCTTCAGCCCCGCCAGCCTCAAGTAAATCAGTTAGGTTTCCCCTTCGGCCTGGAAAGGGCAGCTATGGCACAAAGTGTATAGTCAAAGCTAACCACTTCTTTGCTGAGTTACCCAAGAAAGATCTCCACCAGTATGATGTTACCATAACTCCGGAAGTGCCATCCAGAGTTGTAAACCGTGCTGTTATGGAGCAGCTGGTTAGGCTGTACCGAGAGTCTCATCTAGGCATGCGACTACCTGCATATGATGGTCGCAAGAGCCTGTACACTGCTGGTCCTCTTCCTTTTGTTTCAAATGAGTTTAGAATCACTCTCATTGATGAAGAGGATGGAGCAGGAGCAGCAGCAGCAGGAGCTCAAAGGAGAGTGAGGGAATTCAAAGTTGTGATAAAATTAGCTGCCCGTGCTGACCTTCATCATTTAGGAATGTTTTTGCAAGGAAGACAAACAGATGCACCTCAGGAAGCCCTTCAGGTTCTTGACATTGTTCTGCGTGAACTGCCAAGCACTAGGTATTGTCCTGTCGGAAGATCTTTCTATTCCCCTGATATAGGTAGGAGGCAACCATTAGGTGAGGGTTTGGAGAGCTGGCGTGGGTTTTACCAAAGTATTCGTCCAACTCAGATGGGATTATCCCTGAACATTGATATGTCATCAACAGCATTTATTGAACCACTGCCAGTAATTGATTTTGTAACTCAGCTGCTGAACAGGGATGTCACCACCCGTCCTTTATCTGATGCTGATCGTGTAAAGATCAAAAAAGCACTCCGTGGTGTCAGAGTAGAAGTAACACACCGTGGTAACATGAGAAGAAAATATCGCATCTCTGGCTTGACATCACAGGCAACTAGAGAGCTGACGTTCCCTGTTGATGAGAGGGGGACTGTGAAATCCGTTGTGGAGTACTTCTATGAGACGTACGGATTTGTCATTCAACATACTCAGTGGCCTTGCTTACAAGTGGGAAATACAAATAGACCTAACTATTTACCAATGGAGGTTTGCAAGATTGTAGAAGGTCAAAGGTACACAAAGAGGTTGAATGAGAGGCAGATTACTGCTTTGCTTAAAGTCACCTGTCAGCGACCTGTTGATAGGGAGCGAGATATCATGCAGACGGTTCATCATAATGCTTATCATGAAGATCCTTATGCTAGAGAGTTTGGAATCAAAATCAGTGAGAAACTTGCACAAGTTGAAGCTCGCATTCTTCCTGCGCCTTGGCTGAAGTATCATGATACAGGTAGAGAAAAGGATTGTCTTCCTCAAGTTGGTCAATGGAATATGATGAATAAGAAAATGGTCAATGGGGGAACTGTGAATAGCTGGATCTGCATAAATTTTTCAAGGAATGTTCAAGACAGTGTAGCCAGTGGCTTTTGTTATGAACTTGCACAGATGTGTTATATATCTGGCATGGCATTTAATCCAGAGCCAGTGCTTCCTGTGATCAGTGCCCGCCATGACCAGGTTGAGAAGGTTCTGAAATCACGCTATCATGATGCCAAGGCAAAACTGAAACCGAAAGAGCTTGATCTGCTTATTGTTATTTTGCCGGATAATAATGGCTCTCTTTATGGTGATCTGAAACGCATTTGTGAGACGGATCTTGGGGTTGTTTCCCAGTGTTGTTTGACCAAACATGTCTTTAAGATGAACAAGCAGTACCTTGCAAATGTTGCTTTAAAAATCAACGTGAAGGTTGGTGGAAGGAACACAGTTCTTGTTGATGCCCTTTCAAGACGAATACCTCTAGTTAGTGACCGACCCACAATTATATTTGGAGCTGATGTAACTCATCCACACCCTGGCGAGGATTCTAGTCCATCTATAGCAGCTGTTGTGGCCTCTCAAGATTGGCCTGAAATTACCAAGTATTCGGGTTTGGTTTGTGCTCAAGCACACAGGCAGGAGCTCATCCAAGACCTTTTCAAACAATGGCAAGATCCAGTGAGGGGGACAGTAACCGGTGGAATGATAAAGGAGCTTCTCATTTCTTTTCGAAGAGCCACTGGGCAGAAGCCACAACGCATCATATTTTACAGGGATGGTGTGAGTGAGGGGCAATTTTATCAAGTTTTACTTTTTGAGCTTGATGCCATCCGCAAGGCATGTGCATCATTAGAACCTAACTATCAGCCTCCTGTCACTTTTGTGGTGGTTCAAAAGCGTCATCACACAAGGCTGTTTGCTAACAACCATCATGATCGGAATTCTATTGACCGTAGTGGGAATATATTGCCTGGTACTGTTGTAGACTCTAAAATTTGTCATCCAACTGAGTTTGACTTCTATCTTTGTAGCCATGCTGGGATACAGGGTACAAGCCGACCTGCCCATTACCATGTATTGTGGGACGAGAACAATTTTACAGCAGACGGACTCCAGACTCTGACTAACAACCTCTGCTACACTTATGCAAGGTGCACGAGATCTGTTTCAATTGTGCCGCCTGCGTACTATGCACATTTGGCCGCATTTCGAGCTCGATTTTACATGGAACCTGCCACTTCGGACAGTGAGTCAATGAGTGCTGCTGGGCGCGGGGCGGGTGTTGGTGTTGGACGTAGTACTCGTGCTCCTGGTGCAAGTGCTGCTGTTAGGCCTCTCCCTGCTCTGTGTGATAATGTGAAGAGGGTCATGTTTTATTGTTAA 3363 0.4665 MDTCRISKASTTPTPTQARVRSEWCVCVWSFEGWWHHTITGFSSEEEEEADFAVFIMVRKKRTEGPSGGESSETHESGGSGRGYQRPPERSAQGPQQSAGGPQGGRGWYPQGGRGGGGGGYGGGGGGRGRGSPQQQYSGPPDYQGRGRGGSYQQGGRGGYSGGRGGAGISGRGGGPSYGVPSRPEVPELHQATSASYQAGVTPQSTISEASSVSQPSEITQLEQQTKQLTIHPEVSSAPPASSKSVRFPLRPGKGSYGTKCIVKANHFFAELPKKDLHQYDVTITPEVPSRVVNRAVMEQLVRLYRESHLGMRLPAYDGRKSLYTAGPLPFVSNEFRITLIDEEDGAGAAAAGAQRRVREFKVVIKLAARADLHHLGMFLQGRQTDAPQEALQVLDIVLRELPSTRYCPVGRSFYSPDIGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVTTRPLSDADRVKIKKALRGVRVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTVKSVVEYFYETYGFVIQHTQWPCLQVGNTNRPNYLPMEVCKIVEGQRYTKRLNERQITALLKVTCQRPVDRERDIMQTVHHNAYHEDPYAREFGIKISEKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNSWICINFSRNVQDSVASGFCYELAQMCYISGMAFNPEPVLPVISARHDQVEKVLKSRYHDAKAKLKPKELDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVFKMNKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYSGLVCAQAHRQELIQDLFKQWQDPVRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNSIDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPATSDSESMSAAGRGAGVGVGRSTRAPGASAAVRPLPALCDNVKRVMFYC 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2282 1120 MobiDBLite consensus disorder prediction 189 225 - -
Mibi02g2282 1120 MobiDBLite consensus disorder prediction 62 225 - -
Mibi02g2282 1120 Gene3D - 639 812 - -
Mibi02g2282 1120 Pfam Argonaute linker 2 domain 601 647 IPR032472 -
Mibi02g2282 1120 SUPERFAMILY Ribonuclease H-like 735 1071 IPR012337 -
Mibi02g2282 1120 Pfam Glycine-rich region of argonaut 139 238 IPR024357 -
Mibi02g2282 1120 Pfam Argonaute linker 1 domain 409 459 IPR014811 -
Mibi02g2282 1120 ProSiteProfiles Piwi domain profile. 749 1070 IPR003165 GO:0003676
Mibi02g2282 1120 SUPERFAMILY PAZ domain 262 612 IPR036085 GO:0005515
Mibi02g2282 1120 Gene3D - 818 1120 IPR036397 GO:0003676
Mibi02g2282 1120 CDD Piwi_ago-like 619 1069 IPR045246 -
Mibi02g2282 1120 SMART DUF1785_2 408 460 IPR014811 -
Mibi02g2282 1120 Pfam Mid domain of argonaute 658 733 IPR032473 -
Mibi02g2282 1120 SMART PAZ_2_a_3 465 597 IPR003100 GO:0005515
Mibi02g2282 1120 SMART Piwi_a_2 749 1070 IPR003165 GO:0003676
Mibi02g2282 1120 FunFam Protein argonaute-2 454 580 - -
Mibi02g2282 1120 Pfam N-terminal domain of argonaute 260 399 IPR032474 -
Mibi02g2282 1120 FunFam protein argonaute 10-like 818 1120 - -
Mibi02g2282 1120 Pfam PAZ domain 465 590 IPR003100 GO:0005515
Mibi02g2282 1120 ProSiteProfiles PAZ domain profile. 461 575 IPR003100 GO:0005515
Mibi02g2282 1120 Gene3D paz domain 454 579 - -
Mibi02g2282 1120 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 238 1071 - -
Mibi02g2282 1120 Pfam Piwi domain 750 1069 IPR003165 GO:0003676
Mibi02g2282 1120 FunFam Argonaute 10 639 812 - -
Mibi02g2282 1120 MobiDBLite consensus disorder prediction 231 250 - -
Mibi02g2282 1120 CDD PAZ_argonaute_like 460 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2282 Mibi-ChrMibi02 26003458 26010833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2282 142 1120 Eukaryotic Initiation Factors Gene Family AT1G48410 80.750 0.0 1596