Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2278 ATGGCTACCATCTTCGTCTTCTTCTCCATCTGCTCCCCCAAAATCTCCCGCCAAACCCTCCTTCTCTCTCCTCCCATCCCTCTCTCTCTCTCTCTCCCCTCGGCCGCCGCGGAATCCGTCCTCCCCGGAATCCGCCATGGAAGTATGTATAGAATAATTTCCACTCCCGCCCACAGATTTCGCCACTTCCGGCGCCTCAAATCCAAGCCCTCCGTCTCCACCACCACCGACGAAGAACACGCCTACCACATCCTATGGCGTCACCAGATTCTCGATCCAGACAGCGACATTGTTGCCCGTTGGAACAGAATCTTCCTCATTACCAGTCTTATCGCTCTCTTCATCGATCCTCTTTATCTCTACCTTCCCTATGTCGGAGGCCCTGGTTGCTTGCAAACCAGTACGGAGTTGAGCGTCACCGTCACTCTCCTTCGTTCTTTCTCTGATCTCTTCTATTTGCTCCACATGATCATGAAATTTCGCACCGCCTTCGTTGCCCCTAATTCTAGGGTTTTTGGCCGTGGTGAGCTTGTTACTGATACCCGAGAAATCGCCAGACGTTACTTGAAATCTGATTTCGCTATCGATCTCGCCGCTACGTTTCCCTTGCCCCAGATTGTGATTTGGCTAGTGATTCCATCGTCATCGGCTGACCATGCCCACATCACTCTTGCTCTTTTCGTGCTTATTCAGTACGTACCTAGGCTGTTTCTTATCTTCCCGTTGAACAAGCGTATCGTCAAAACCTCTGGTGTTGTTGCCAAGACTCCTTGGACTGGAGCTGCCTATAATATTCTCCTCTACATGCTTGCCAGTCACGTTATAGGAGCAACTTGGTATTTATCTGCAATAGCGCGACAATTAAACTGTTGGACTGAAGAGTGCAAAGCTGAGAACAGCTTACAGACCTTGTCTTGCCTTACAAGTTATCTTGATTGTGGAAGTTTGGGCAACCCTGATAGGCAATACTGGCTAAACGTCACTAATGTTGTTAAGAGTTGCGATGTAAAGAGTGGAAATAACAAGTATTCGTTTGGCATGTTTCAAGATGCTTTCAGGAAGGCAGTCGCTACTGGCAGTTTCAGTGAGAGATTCTTCTATTGTCTTTGGTGGGGTATAAAAAATTTAAGCTCATACGGACAGACCTTGGACACCACTGTATTTCTTGGGGAAACGCTTTTTTCCATCATCCTATGCGTTGTTGGATTAGTTCTCTTTGCACTTTTGATTGGAAACATGCAGACATATTTAGAGTCAATGTCAGCAAGACTTGAAGAATGGAGGATTAGGAAGAAAGACACAGAAGAATGGATGAGGCATCGCCAGTTACCTCCAGATTTGCAGGAACGTGTCCGCCGCTTTGTCCATTATCAATGGCTTGCCACAAGAGGAGTTGATGAGAAATCCATACTGCTTTCATTACCTTTGGATCTTCGCCGTGAAATTCAAAGTCATTTGTGTCTCGCCCTTGTTCGGCGTGTGCCATTCTTTTCACAAATGGACAATCAGCTGCTTGATGCGATTTGTGAACACCTTGTGTCGTCCTTAAGCACTGAAGGCGCCTACATTTTTCGGGAGGGTGATCCGGTGAATGAAATGTTGTTCATTATAAGAGGGCAACTTGAGAGCTCAACAACAAATGGTGGAAGGTCTGGGTACTTTAACTCCATTACCCTTAGACCTGGAGACTTTTGTGGGGAGGAACTATTGACATGGGCCCTAATGCCAAACTCAAGCTCAAACCTTCCTTCCTCAACTCGAACTGTGAAGGCCCTCACCGAAGTGGAAGCTTTTGCATTAAAAGCAGAAGATCTTAAAGCCGTGGCGGCTCAGTTCAAGCGGCTTCACAGTAAGAAACTTCAGCATGCTTTTAGGTATTATTCGCATCAATGGCGGGCGTGGGCAGCTTGCTTAATTGAGGAAGCTTGGAGAAGGTACAAGAAACGGAAGGCATATAGAGAGTTATCCTTGAGAGAGAGCCTATACTATATTGCAAGACCTGAGGTAGAAGAAGCTAGTAACAGTGACATGCTTGAAATGGAGGAGATCTCATTAAATGACAATAATAATCAAGTTCTTGCTGCAACTGGTATGGCCTTCACTTTTGCTGCAAATGTAAGGAAAGGGATTTCTAGTACTGGCCAAAATGCTCCATTATTCAAGCCAGATGAACCTGATTTCTCTCTTCTATAG 2193 0.4615 MATIFVFFSICSPKISRQTLLLSPPIPLSLSLPSAAAESVLPGIRHGSMYRIISTPAHRFRHFRRLKSKPSVSTTTDEEHAYHILWRHQILDPDSDIVARWNRIFLITSLIALFIDPLYLYLPYVGGPGCLQTSTELSVTVTLLRSFSDLFYLLHMIMKFRTAFVAPNSRVFGRGELVTDTREIARRYLKSDFAIDLAATFPLPQIVIWLVIPSSSADHAHITLALFVLIQYVPRLFLIFPLNKRIVKTSGVVAKTPWTGAAYNILLYMLASHVIGATWYLSAIARQLNCWTEECKAENSLQTLSCLTSYLDCGSLGNPDRQYWLNVTNVVKSCDVKSGNNKYSFGMFQDAFRKAVATGSFSERFFYCLWWGIKNLSSYGQTLDTTVFLGETLFSIILCVVGLVLFALLIGNMQTYLESMSARLEEWRIRKKDTEEWMRHRQLPPDLQERVRRFVHYQWLATRGVDEKSILLSLPLDLRREIQSHLCLALVRRVPFFSQMDNQLLDAICEHLVSSLSTEGAYIFREGDPVNEMLFIIRGQLESSTTNGGRSGYFNSITLRPGDFCGEELLTWALMPNSSSNLPSSTRTVKALTEVEAFALKAEDLKAVAAQFKRLHSKKLQHAFRYYSHQWRAWAACLIEEAWRRYKKRKAYRELSLRESLYYIARPEVEEASNSDMLEMEEISLNDNNNQVLAATGMAFTFAANVRKGISSTGQNAPLFKPDEPDFSLL 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2278 730 Gene3D Jelly Rolls 494 614 IPR014710 -
Mibi02g2278 730 Gene3D Helix hairpin bin 420 487 - -
Mibi02g2278 730 Gene3D - 104 419 - -
Mibi02g2278 730 SUPERFAMILY Voltage-gated potassium channels 92 418 - -
Mibi02g2278 730 SMART cnmp_10 496 627 IPR000595 -
Mibi02g2278 730 FunFam Cyclic nucleotide-gated ion channel 1 494 612 - -
Mibi02g2278 730 Pfam Cyclic nucleotide-binding domain 519 611 IPR000595 -
Mibi02g2278 730 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 74 727 - -
Mibi02g2278 730 ProSiteProfiles cAMP/cGMP binding motif profile. 496 626 IPR000595 -
Mibi02g2278 730 CDD CAP_ED 496 627 IPR000595 -
Mibi02g2278 730 SUPERFAMILY cAMP-binding domain-like 426 621 IPR018490 -
Mibi02g2278 730 Pfam Ion transport protein 101 423 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2278 Mibi-ChrMibi02 25916420 25921400 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2278 71 729 Ion Channels AT5G14870 65.300 0.0 936