Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi02g2277 | ATGATTCTCTCGCCTTCAAGATTCTCTCGCCTTCAAGTGGTGGCTCAAAAGTCAAAACAAACAATTTCAGGACTATGGAAACTGGGAGCATCTATACCATCACTATCCTCATTGTCGCAAAATCCGAACTTGGTAAGCTTTTCTGGCTCCATTCCTGAAGCTCAGTTCGCCGGAGAAGAAATGTCAACCACCGTTTCTGCCACCACCAATCCTGCAATTTCTTTAATCAACAATGTTCAGAGAGTAAGAATTAGTATGGCTAACTTTCGAAGCAGCACAAATTTCCCTTCCTCATCTCTCAGAAATGGCTCCTCCTCCTCCTTCGCTTTGGCTTGTTCACCTCATCATCATCCTCCTCCTTCTCCCAATACCAAACCCAATTCTTCTCCTTCAACTAGGCTCTACGTCAGTGGGCTATCTTTCCGTACCACTGAAGAGAGCTTGCGAAACGCTTTTCAGAAATTTGGTGAACTTGTGGAAGTCAACCTTGTGATGGATAAAATAGCAAACAGACCAAGAGGATTTGCCTTTCTTCGTTATACAACTGAAGAGGATTCTCAGAAGGCTATTGATGGAATGCATGGGAAATTCTTAGATGGTAGGGTGATATTTGTGGAAATTGCAAAACCAAGATCAGAGTTGCGGCAGAGGCTTAACCAAAACCAAAACCAAAACCCTAGATAA | 684 | 0.4313 | MILSPSRFSRLQVVAQKSKQTISGLWKLGASIPSLSSLSQNPNLVSFSGSIPEAQFAGEEMSTTVSATTNPAISLINNVQRVRISMANFRSSTNFPSSSLRNGSSSSFALACSPHHHPPPSPNTKPNSSPSTRLYVSGLSFRTTEESLRNAFQKFGELVEVNLVMDKIANRPRGFAFLRYTTEEDSQKAIDGMHGKFLDGRVIFVEIAKPRSELRQRLNQNQNQNPR | 227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi02g2277 | 227 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 134 | 203 | IPR000504 | GO:0003723 | |
Mibi02g2277 | 227 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 132 | 210 | IPR000504 | GO:0003723 | |
Mibi02g2277 | 227 | SMART | rrm1_1 | 133 | 206 | IPR000504 | GO:0003723 | |
Mibi02g2277 | 227 | PANTHER | NUCLEOLAR PROTEIN 8 | 119 | 224 | - | - | |
Mibi02g2277 | 227 | MobiDBLite | consensus disorder prediction | 106 | 131 | - | - | |
Mibi02g2277 | 227 | SUPERFAMILY | RNA-binding domain, RBD | 112 | 224 | IPR035979 | GO:0003676 | |
Mibi02g2277 | 227 | Gene3D | - | 115 | 227 | IPR012677 | - | |
Mibi02g2277 | 227 | SMART | rrm2_1 | 133 | 206 | IPR003954 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi02g2277 | Mibi-ChrMibi02 | 25908529 | 25912420 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi02g2277 | 123 | 221 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 29.126 | 2.15e-10 | 58.2 |