Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2277 ATGATTCTCTCGCCTTCAAGATTCTCTCGCCTTCAAGTGGTGGCTCAAAAGTCAAAACAAACAATTTCAGGACTATGGAAACTGGGAGCATCTATACCATCACTATCCTCATTGTCGCAAAATCCGAACTTGGTAAGCTTTTCTGGCTCCATTCCTGAAGCTCAGTTCGCCGGAGAAGAAATGTCAACCACCGTTTCTGCCACCACCAATCCTGCAATTTCTTTAATCAACAATGTTCAGAGAGTAAGAATTAGTATGGCTAACTTTCGAAGCAGCACAAATTTCCCTTCCTCATCTCTCAGAAATGGCTCCTCCTCCTCCTTCGCTTTGGCTTGTTCACCTCATCATCATCCTCCTCCTTCTCCCAATACCAAACCCAATTCTTCTCCTTCAACTAGGCTCTACGTCAGTGGGCTATCTTTCCGTACCACTGAAGAGAGCTTGCGAAACGCTTTTCAGAAATTTGGTGAACTTGTGGAAGTCAACCTTGTGATGGATAAAATAGCAAACAGACCAAGAGGATTTGCCTTTCTTCGTTATACAACTGAAGAGGATTCTCAGAAGGCTATTGATGGAATGCATGGGAAATTCTTAGATGGTAGGGTGATATTTGTGGAAATTGCAAAACCAAGATCAGAGTTGCGGCAGAGGCTTAACCAAAACCAAAACCAAAACCCTAGATAA 684 0.4313 MILSPSRFSRLQVVAQKSKQTISGLWKLGASIPSLSSLSQNPNLVSFSGSIPEAQFAGEEMSTTVSATTNPAISLINNVQRVRISMANFRSSTNFPSSSLRNGSSSSFALACSPHHHPPPSPNTKPNSSPSTRLYVSGLSFRTTEESLRNAFQKFGELVEVNLVMDKIANRPRGFAFLRYTTEEDSQKAIDGMHGKFLDGRVIFVEIAKPRSELRQRLNQNQNQNPR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2277 227 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 134 203 IPR000504 GO:0003723
Mibi02g2277 227 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 132 210 IPR000504 GO:0003723
Mibi02g2277 227 SMART rrm1_1 133 206 IPR000504 GO:0003723
Mibi02g2277 227 PANTHER NUCLEOLAR PROTEIN 8 119 224 - -
Mibi02g2277 227 MobiDBLite consensus disorder prediction 106 131 - -
Mibi02g2277 227 SUPERFAMILY RNA-binding domain, RBD 112 224 IPR035979 GO:0003676
Mibi02g2277 227 Gene3D - 115 227 IPR012677 -
Mibi02g2277 227 SMART rrm2_1 133 206 IPR003954 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2277 Mibi-ChrMibi02 25908529 25912420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2277 123 221 Eukaryotic Initiation Factors Gene Family AT4G34110 29.126 2.15e-10 58.2