Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2259 ATGTGCAGTAGAGGCCATTGGAGGCCGGCCGAGGATGAGAAACTTAAAGAGTTGGTGGAGCACTATGGACCTCATAACTGGAACGCCATAGCTGAAAAGCTTCGAGGAAGATCAGGGAAGAGTTGCAGGCTTAGGTGGTTTAATCAGCTAGACCCAAGAATAAATAGGAGCCCATTCACAGAGGAAGAAGAAGAGAGGCTTGTGGCATCTCACAGGATACATGGAAACAGATGGGCAGTGATAGCTAGGCATTTTCCAGGAAGAACTGATAATGCCGTTAAGAATCATTGGCATGTTATGATGGCTAGGATTCGCAGAGAAAGATCCAAAGTTCATTCCAAACAACAACGCCCTCTTCATCATCATCATCACCTCACTGCTACTACTTCTACAGCCTCAGATCATGACCATCATGATCATACAAAGAAGACTATGATTGGTCCTATTATTGTTCCTGCTTTCTTTGAGAAGTACTATGATAAGCATGCCTTCCCAGCCTATTGTCTCCCTTATCATAATAACCCTTTCCTTCAATTCCCCACCAAATTTCATCACCAACTTCCGCATCCTTCTTCCTCTTCATCACTTCTTCATGATAAGAGTGAATCAGTAGAGTTCTACGACTTTCTTCAAGTGAACACTGATTCTAACAATAGAAGCGATGTGACAGACAATGCCAGAAGAGAAGATGAAGAAGTGAATCAAGATAATGTGGCAGGAGGAGGCCGAGGGAAGAACAAAGACGGCGGCGGCGGCGTTTCGTTCATCGATTTTTTGTCTGTTAATGGAAAAGCTAGCTAG 801 0.4395 MCSRGHWRPAEDEKLKELVEHYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLVASHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRERSKVHSKQQRPLHHHHHLTATTSTASDHDHHDHTKKTMIGPIIVPAFFEKYYDKHAFPAYCLPYHNNPFLQFPTKFHHQLPHPSSSSSLLHDKSESVEFYDFLQVNTDSNNRSDVTDNARREDEEVNQDNVAGGGRGKNKDGGGGVSFIDFLSVNGKAS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2259 266 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Mibi02g2259 266 MobiDBLite consensus disorder prediction 217 251 - -
Mibi02g2259 266 MobiDBLite consensus disorder prediction 107 140 - -
Mibi02g2259 266 Gene3D - 4 55 - -
Mibi02g2259 266 MobiDBLite consensus disorder prediction 221 236 - -
Mibi02g2259 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
Mibi02g2259 266 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Mibi02g2259 266 Gene3D - 57 124 - -
Mibi02g2259 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Mibi02g2259 266 FunFam MYB transcription factor 4 55 - -
Mibi02g2259 266 Pfam Myb-like DNA-binding domain 7 67 - -
Mibi02g2259 266 CDD SANT 7 48 IPR001005 -
Mibi02g2259 266 CDD SANT 58 101 IPR001005 -
Mibi02g2259 266 SMART sant 55 103 IPR001005 -
Mibi02g2259 266 SMART sant 3 52 IPR001005 -
Mibi02g2259 266 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Mibi02g2259 266 MobiDBLite consensus disorder prediction 107 124 - -
Mibi02g2259 266 PANTHER MYB PROTEIN-RELATED 4 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2259 Mibi-ChrMibi02 25639679 25641909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2259 1 266 MYB Transcription Factor Family AT1G17950 51.111 1.76e-81 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g2259 Myb_DNA-bind_6 4.5e-16 CL0123