Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2253 ATGGCGGACACAAACTCTGTTGAAGTCATATTGGACTTTCTGAGGAAGAATCGTTTCACAAGGGCTGAAGCTGCATTGCGTGGTGAGCTTAATAGCCGTTCTGACTTAAATGGATTTCTTGAGAAGCTTTCCTTGGAAGAAAAGACCTTGCACAATAAGTCTGAAAATGACAGGAGGAAGCCAGTTGTAGAAATTCAAGGGTCAGGTTCTCATAATACTGTTGAAGTGTCAAAAGAACTAATTGTGAAGGAAATAGAGTGTGGGACTGGTAGGAATGAAACTGAAAGCAAATGGAAAAATGTACCTTCTGTTGGGGAACGGAATAAATTAAACGAAGTTGCTGGGACAAGTGACAAAAGTTTAGCTTTCTCTAAAAGTTCAGAGGATGGTGTGCTGGATTTATACTCATGGAAGTTCAATCCTGGCAATGGTCTTGTGGAGCCTTTCCAAAACGATGTGGGCACAAGTTCCAATAGTAGTTTGAAGGGTCCATCATCTAAGCAATCAAAATATCAAACAAATGAATCTCCTGATGTGTCCAACACCTTTGCGAAATCTGGAGGGGAAAATACTGTTTCCACTGATAAGAAAGCCTCATGGCTTGGAAGTGGTATTACTAGAGCCTCTGTGGAACAAAAACATGAAAGCTTGCAAGTCAAAGAACCTAGGGAATCTGATCGGCAGCTCAAATATAACAATTTATCTTTTAAGGAGAACTTTGCAGATAATCCCTGGTCAACAACTGATGAAAATGGTAATTCATCTTCGGACATTTGGAGAGATTGTCCTGTCAAGACTGTTTTCCCCTTCTCTAAGGACAATGTTTCTTCAAGTTGTGATAATGCACCTTATACAGACAAGAAAGAGGAAAAAAGAAGGGCAGATACAAGTGATATTCGTGCATCAATAAAAGAGCAAGTGGATGAAGTTGGTAGAGCTATTTTCTTAGGCAAGTCACAAGGCAGTTCAGACCAGAAGACCATTGGTAGCATAAGTTTCCCTTTTGCACCTGGGAATCAGAAGGAAGAATTTCCTAGGCTTCCTCCTGTTAAACTAAAGTCAGAGGATAAGCCTTTGGCAATTAACTGGGAGGAGAAGTTTGAGCGTGATGGACCTGCTTCAAGAATAGCTGCTGCTGACGGCTCTTTAATCATAGGATCATTTTTGGATGTGCCCGTCGGACAAGAAATTAATCCTTCAGGTATGAGGAGGGCTACAGGGGGCAGTTGGCTATCTGTAAGTCAAGGGATAACAGAGGATACATCTGATCTTGTGTCTGGTTTTGCTACAATTGGTGATGGGTTGAGTGAATCTGTTGACTATCCAAATGAATATTGGGATTCTGATGAATATGATGATGATGATGATGTTGGGTACATGAGACAGCCTATTGAGGATGAATCTTGGTTTTTGGCGCATGAAATTGATTACCCTAGTGATAATGAAAAGGGGAATGGCCATGGAAGTGTTCCGGATCATCAGGATAGAGGTCCAGCCAAGGATGACGACGATGATCAGTCTTTTGCTGAAGAGGATTCTTACTTCTCTGGAGAGCAATATCTTCAAGCAAAGAATGTTGAACCAATTACAGCTTCTGATGATCCTATTGGTTTGACAGTAACTGAAGTGTATGACAGGACTGATGGGGGTGATCTGATGGCTCAATATGATGGACAGTTGATGGATGAAGAAGAATTGAATCTCATGCGTGCAGAACCTGTCTGGCAGGGCTTTGTAACACAGACAGATGACCTAATCATGCTTGGAGATGGGAAGGTTCTTAATGACAGTGGAAGATTACGACTTGAGGATGTTTGTATGGATGATGATCAGCATGGTTCAATTAGGTCAATTGGAGTGGGAATTAACAGTGATGCTGCAGATATTGGCAGTGAAGTGCGTGAAAGTTTGGTTGGTGGTAGCAGTGAAGGTGATTTAGAGTATTTCCGTGATCATGATGTTGGACTTAGCAGCCCTAGACACTCTCATCATGATCTCAATAAGAAATCTACCAATAAATTGAGCAAATATAGGAAGAAAAATGACAAGGGGGAGTTAAATAAACATGTCATTGAGGAGGATAAAGGTACATTGCAGATGAAACCTCATACTGATGGGAGCTTCTCATTTCCCCTATCCCTGAAAGATGGTCCGACAATTCAGGCTGGCACTAGTAAGCCCCTGTGGTCTAACTGCAATGCTGATGAGAATGATGACTGTCTTAATGCACTTGTGGGATCTGATGATATGCTTGCTTTATGGAGACGGAAGAGCAGTGATTCTTCACCCTCAAAAAGTTCTAGGGATGGGAATGATGCTAATGTAAGGTCTGCTAACTCTTCTCCAACAGTCTCAAATTATGGATATATTGAAAAAGAGCATGTCAAGCTTGAAGGGGATGAAAATGATGGTGGTGCAAGGGAAGAAGATCATGGGGCATCACTGGAAGATGAAGAGGCTGCTGCTGTTCAAGAGCAAGTAAGACAAATAAAGGCACAGGAGGAGGAATTTGAGACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAAGACAAGAATTTCCATGTTGTTTTAAATTCTGTGATAGCTGGGCGATATCATGTCACTGAGTATCTTGGATCTGCTGCATTTAGCAAAGCTATACAGGCTCATGACCTCCATACTGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAAGACTTTTTCGATCAAAGCCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGACCCTGCAGACAAGTATCACCTTCTTCGGCTGTATGATTATTTCTATTATAGAGAGCATCTGTTAATAGTATGTGAGCTACTTAAAGCAAATTTATACGAGTTCCATAAATTTAATAGAGAATCAGGAGGGGAAGTGTACTTCACTATGCCAAGACTGCAGTCAATAACCATTCAATGTTTGGAAGCACTTCAGTTTCTGCACAGCCTTGGATTAATACATTGTGACTTGAAGCCTGAGAATATTTTGGTAAAAAGCTATAGCAGATGTGAGGTGAAGGTCATTGATCTTGGGAGTAGCTGTTTTGAGACAGATCACCTTTGTTCATATGTTCAGTCAAGGTCTTATCGAGCTCCTGAGGTTATTTTGGGACTCCCATATGACAAGAAGATTGATATCTGGTCACTTGGTTGCATCTTGGCGGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCACCGGCAACATTACTTGCCCGAGTGATTGGCATCATTGGTCCAATTGATCAAAGCATGCTTGCAAAAGGACGGGATACATACAAGTATTTCACCAAAAATCATATGCTTTATGAAAGGAACCAGGAAAGCAACAGGTTGGAGTACCTTATTCCAAAGAAGACATCCTTGAGGCACAGACTGCCTATGGGAGATCAAGGCTTCATTGACTTTGTTGCACATTTACTCGAGATTAACCCAAAGAAGCGGCCTTCTGCATCAGAGGCCCTGAAGCACCCATGGTTATCATACCCATATGAACCGATATCATCCTGA 3549 0.4134 MADTNSVEVILDFLRKNRFTRAEAALRGELNSRSDLNGFLEKLSLEEKTLHNKSENDRRKPVVEIQGSGSHNTVEVSKELIVKEIECGTGRNETESKWKNVPSVGERNKLNEVAGTSDKSLAFSKSSEDGVLDLYSWKFNPGNGLVEPFQNDVGTSSNSSLKGPSSKQSKYQTNESPDVSNTFAKSGGENTVSTDKKASWLGSGITRASVEQKHESLQVKEPRESDRQLKYNNLSFKENFADNPWSTTDENGNSSSDIWRDCPVKTVFPFSKDNVSSSCDNAPYTDKKEEKRRADTSDIRASIKEQVDEVGRAIFLGKSQGSSDQKTIGSISFPFAPGNQKEEFPRLPPVKLKSEDKPLAINWEEKFERDGPASRIAAADGSLIIGSFLDVPVGQEINPSGMRRATGGSWLSVSQGITEDTSDLVSGFATIGDGLSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDESWFLAHEIDYPSDNEKGNGHGSVPDHQDRGPAKDDDDDQSFAEEDSYFSGEQYLQAKNVEPITASDDPIGLTVTEVYDRTDGGDLMAQYDGQLMDEEELNLMRAEPVWQGFVTQTDDLIMLGDGKVLNDSGRLRLEDVCMDDDQHGSIRSIGVGINSDAADIGSEVRESLVGGSSEGDLEYFRDHDVGLSSPRHSHHDLNKKSTNKLSKYRKKNDKGELNKHVIEEDKGTLQMKPHTDGSFSFPLSLKDGPTIQAGTSKPLWSNCNADENDDCLNALVGSDDMLALWRRKSSDSSPSKSSRDGNDANVRSANSSPTVSNYGYIEKEHVKLEGDENDGGAREEDHGASLEDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASEALKHPWLSYPYEPISS 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2253 1182 MobiDBLite consensus disorder prediction 283 297 - -
Mibi02g2253 1182 MobiDBLite consensus disorder prediction 477 509 - -
Mibi02g2253 1182 Pfam Protein kinase domain 871 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2253 1182 MobiDBLite consensus disorder prediction 148 198 - -
Mibi02g2253 1182 Gene3D Transferase(Phosphotransferase) domain 1 925 1173 - -
Mibi02g2253 1182 MobiDBLite consensus disorder prediction 149 198 - -
Mibi02g2253 1182 FunFam Putative serine/threonine-protein kinase dyrk2 865 952 - -
Mibi02g2253 1182 PANTHER DUAL SPECIFICITY PROTEIN KINASE 409 1173 - -
Mibi02g2253 1182 FunFam Serine/threonine-protein kinase ppk15 950 1174 - -
Mibi02g2253 1182 ProSiteProfiles Protein kinase domain profile. 871 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2253 1182 ProSitePatterns Serine/Threonine protein kinases active-site signature. 997 1009 IPR008271 GO:0004672|GO:0006468
Mibi02g2253 1182 MobiDBLite consensus disorder prediction 477 503 - -
Mibi02g2253 1182 MobiDBLite consensus disorder prediction 756 790 - -
Mibi02g2253 1182 SMART serkin_6 871 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2253 1182 MobiDBLite consensus disorder prediction 653 700 - -
Mibi02g2253 1182 CDD PKc_DYRK_like 871 1173 - -
Mibi02g2253 1182 MobiDBLite consensus disorder prediction 275 297 - -
Mibi02g2253 1182 SUPERFAMILY Protein kinase-like (PK-like) 860 1175 IPR011009 -
Mibi02g2253 1182 MobiDBLite consensus disorder prediction 653 704 - -
Mibi02g2253 1182 Coils Coil 823 843 - -
Mibi02g2253 1182 Gene3D Phosphorylase Kinase; domain 1 865 952 - -
Mibi02g2253 1182 MobiDBLite consensus disorder prediction 757 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2253 Mibi-ChrMibi02 25591385 25600876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2253 870 1168 MAP Kinase Gene Family AT5G19010 31.034 8.60e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Mibi02g2253 Pkinase 1.1e-50 CL0016