Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2240 ATGGAAGGAGGAGGAGATCACAACAATAACTCATCAACAAACTCAATCTACAGAGAGTGCCTAAGAAACCATGCAGCCAGCCTTGGTAGCTACGCCACCGACGGCTGCGGCGAGTTCACCCTCGACGACACATCTCCGGCCGCCGGAGGCTGCCTCCAATGCGCCGCCTGCGGCTGCCACCGCAACTTCCACCGGAAGGTGACGTGCCCGCCGCCGCCACGGCTCACGTCGGGGGCGGCGACCGGGGAGATGATGGAGTACAGCGGCGGCGAGGGGACGCCGCCGCCGCCGCCGGGGATGATGGTGGACGGCGGAGGCGGGGAGATGATGATGATGATGAGGAACAAGAAGCGGTTCAGGACGAAGTTCACGGCGGAGCAGAAGGAGAAGATGATGGGGTTCGCGGAGAAGTTGGGGTGGAAGTTGCAGAGGAAGGATCTTGATGATGAGATTGAGAGGTTTTGCAGAGGGGTTGGAGTTAGCAGGCAAGTGTTCAAGGTTTGGATGCATAATCATAAGAACTCTTCCTCCTCTTCTAATTCTGCTAATTCTACTGGCAATGCCTCTTCTCTTACCCAGTAA 582 0.5773 MEGGGDHNNNSSTNSIYRECLRNHAASLGSYATDGCGEFTLDDTSPAAGGCLQCAACGCHRNFHRKVTCPPPPRLTSGAATGEMMEYSGGEGTPPPPPGMMVDGGGGEMMMMMRNKKRFRTKFTAEQKEKMMGFAEKLGWKLQRKDLDDEIERFCRGVGVSRQVFKVWMHNHKNSSSSSNSANSTGNASSLTQ 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2240 193 FunFam Zinc-finger homeodomain protein 2 104 178 - -
Mibi02g2240 193 Gene3D - 106 180 - -
Mibi02g2240 193 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 116 174 IPR006455 -
Mibi02g2240 193 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 17 66 IPR006456 -
Mibi02g2240 193 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 17 67 IPR006456 -
Mibi02g2240 193 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 12 175 - -
Mibi02g2240 193 MobiDBLite consensus disorder prediction 172 193 - -
Mibi02g2240 193 SUPERFAMILY Homeodomain-like 102 174 IPR009057 -
Mibi02g2240 193 Pfam ZF-HD protein dimerisation region 16 68 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2240 Mibi-ChrMibi02 25400479 25401060 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2240 17 175 ZF-HD Transcription Factor Family AT4G24660 46.409 2.33e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mibi02g2240 ZF-HD_dimer 4e-23 No_clan