Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2226 ATGGTTCTTGGATGGCGAAGAAGAAAGAACAACCGTCGCAACGAGAAGCTCCTCCACCTCGAGCTCGTAATCCCCAACCACTTCCGTTGCCCAATTTCTCTCGATCTCATGAAAGATCCCGTCACATTGTCCACAGGAATCACCTACGATCGTGAAAACATCGAAAGGTGGTTCCTTGACGGCAATTTCACCTGCCCTGTTACCAATCAGATACTCAGAAGCTTCGATCTAATCCCCAACCACACTCTCCGCATAATGATTCAAGATTGGTGTGTCGAAAATCGAACACATGGGGTTGAGAGAATCCCCACCCCAAGAATACCCGTTTCACCAATCCAAGTCTCAGAGCTTCTTCTTCAATTGAAATCTTCGGCTAGGCGTTTGGATCAATATGGGTGCCTTGAATTGGTTCAGAAAATGGAGAAATGGGGTGAAGAGAGTGAGAGGAATAAGAAGTGTATAGTTGAGAATGGAGCTACTGGTGCTTTGGCTAATGCTTTTGATTCTTTTGCTAATGATTCGATTGAGAAGAATGTGAGTGTTTTGGAGGAGATTTTGTCTGCTTTGAATTGGATGTTCCCACTTCAAATGGAAGAAGCTCAGAAATGGTTGGGATCACAGGCTTCATTACGTTGCATGGTTTGGTTCCTGAAACATCAAGATCTCGCAGGTAAAGAGAAATCCATTGTTGCTCTCAGGGAGCTTTTATCTTTCAGAAAGGAAGAACACTTGAATGTTCTTTCAGAAATTGAAGGAGTCAACGAATTATTGGTTGAATTTATCACAAAAAGAATCGGTCCAACCATTACAAAAGCTTCATTAGCTGTAGTTTTCTATTTAGTCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCAATCAACAAGATGAAACAGAGATTCATTGAACAGGGTTTGGTTTCTTCTTTACTGGAGATTCTTGTTGACTCAGAAAGAAGTCTCTGTGAGAAGGCTTTGGCAATTTTTGATTCACTTTGTTCTTGCAAGGAAGGAAGAGAAAAGGCTTACATTAATGCGTTGACGATCCCAGTGTTGGTGAAGAAGATATTGAGAGTTTCAGCAATGGCTACAGAGTGTTCTGTTTCTGCAATATGGAAGCTGAGCAAGAATGGAGGAGAAGAGAAGAAAGAGGAGGAAGAAGAGGTTATGAAAGAGGCACTTCAAGTTGGCGCATTTCAGAAGTTATTGGTAGTTTTGCAGATTGGATGTGGGGATGAAACGAAGGTGAAAGCAACTGAACTTCTTAAACTTTTGAATCAATATGGGTCATCTGGCATGGATTGTGTAGACTCTGATTTTAAGGACCTCAAGAGATCTCATTAG 1341 0.4161 MVLGWRRRKNNRRNEKLLHLELVIPNHFRCPISLDLMKDPVTLSTGITYDRENIERWFLDGNFTCPVTNQILRSFDLIPNHTLRIMIQDWCVENRTHGVERIPTPRIPVSPIQVSELLLQLKSSARRLDQYGCLELVQKMEKWGEESERNKKCIVENGATGALANAFDSFANDSIEKNVSVLEEILSALNWMFPLQMEEAQKWLGSQASLRCMVWFLKHQDLAGKEKSIVALRELLSFRKEEHLNVLSEIEGVNELLVEFITKRIGPTITKASLAVVFYLVSSSSSSSSSSSINKMKQRFIEQGLVSSLLEILVDSERSLCEKALAIFDSLCSCKEGREKAYINALTIPVLVKKILRVSAMATECSVSAIWKLSKNGGEEKKEEEEEVMKEALQVGAFQKLLVVLQIGCGDETKVKATELLKLLNQYGSSGMDCVDSDFKDLKRSH 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2226 446 SUPERFAMILY ARM repeat 162 390 IPR016024 -
Mibi02g2226 446 SMART Ubox_2 27 90 IPR003613 GO:0004842|GO:0016567
Mibi02g2226 446 FunFam RING-type E3 ubiquitin transferase 24 95 - -
Mibi02g2226 446 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 101 IPR013083 -
Mibi02g2226 446 SUPERFAMILY RING/U-box 23 100 - -
Mibi02g2226 446 Pfam U-box domain 24 95 IPR003613 GO:0004842|GO:0016567
Mibi02g2226 446 ProSiteProfiles U-box domain profile. 23 97 IPR003613 GO:0004842|GO:0016567
Mibi02g2226 446 CDD RING-Ubox_PUB 28 70 IPR045210 -
Mibi02g2226 446 Gene3D - 116 437 IPR011989 -
Mibi02g2226 446 PANTHER WDSAM1 PROTEIN 21 426 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2226 Mibi-ChrMibi02 25121192 25122532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2226 5 444 U-box Gene Family AT5G37490 44.321 1.34e-118 352