Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2224 ATGTTAACAAAGCTCATGAGCTTCCACAGACGAACCAGAAGATCCCCAGAAGAAGAAGAAGAAGACGACGACGACGACGAAGAAGAAGAAGATCGGAGTTTTGGTTTCTCTGTTAATCCCACTCATCTTTGCCGCGACTTCTTCATCCATCCCCATAATCGGTGGTACGTAGTGTGGAAGCATTTCATTCTGATATGGGCAGTGTATTCTTCCTTCTTCACTCCCATGGAGTTCGGTTTCTTCAGAGGCTTGCCGGAGGAGATTTTCTTTCTCGATATTGCCGGCCAATTCGCTTTCCTCCTCGATATCATCATTCGATTCTTCCTCGCCTATCGCGATACTTCCTCAAATTCCTGGGTCTACAATCACCGTCAAATCGCCAAGAGGTATTTGAAGTCTCGATTCGTGCTTGATTTTCTCAGTTGTCTTCCATGGGATTATATTTATAAGGCTGCTGGCAGGAAAGAGCCAGTGAGGTATCTTCTATGGATCAGGCTATGGCGAGCATGTAGAGTGATCGAATTTTTTTACAGGCTGGAGAAAGATCTTAGGATTGATTACCGATTTACTAGGATTGTCAAGCTTCTTGTTGTGGAACTCTATTGCACGCATACGGCTGCCTGCATCTTCTACTATCTTGCTACCACTTTGCCTCCCTCCAAGGAAGGTTATACATGGATAGGCAGCCTGACGATGGGTGACTACAGCTATTCGGACTTTAGACATATTAGTCTTTGGAGGCGTTATGTGACATCACTCTACTTTGCAATTGTCACCATGGTAACTGTTGGCTTTGGAGAAATTCATGCGGTCAATGTCAGAGAAATGATATTTGTCATGATATTTGTTTCCTCTGACATGATTTTGGGTGCTTACCTTCTTGGTAACATGACAGCATTGGTTGTGAAAGGATCAAGAACAGAGAAGTTTAGGGACAAAATGTCTGAACTGATCAAGTACATGAATAAAAATAATTTGGACAAGCAGATAACTAAGGAGATCAGAGGCCATTTGCGCTTACAGTATGATCGCAGTGACACTGAGGCTGCTATTGATGAAGATATTCCAGTTTCCATCCGCACAAAGATTTCAATGAATTTGCATGAGCAGTTCATTCAGAAAGTTCATCTTTTCAAGGGATGCTCTTCTGGGTTCATTAAACATGTTGCAATCAATGTCCATGAGGAGTTTTTTCTCCTAGGAGAAGTTATTATGGAGCAAGGAGATGTGGTAGATCAACTTTACCTTGTATGCCATGGTGAGCTGGATGGGCTAAGAAAGGAAAATGATGAAAGAGAAGAGCTAGTTAAGCAATATCAGACCTATAGTTCCTTTGGCGAGGTTTCCTTTCTTTGTAATTTGCCTCAACCTTACATGGTTCGTGCTCGTGAATTTTGCAAAGTTCTGCGTCTAGATAAGATATCCTTCACAGAAACACTCAAGACATACTTCTTAGATGGTCGGGTTATCTTGCAAAATCTTCTTGAGGGAAAGGACTCTGGTCTTCAGTATAAGCTTTTGGAATCAGACTTCACCCTGACAATTGGAAATCGTGAAACAGAACTGGCTATGAGGATTAATTATGCTGCCTATGAGGGGGATTTCTATCTTTTGAAACATTGGATTGAATCAGGACTAGATCCCAACAGAACTGATTATGATGGAAGATCACCTTTACATATTTCTGCATCCAAAGGCCATGTAGATATTTCCCGTTTTCTTATTGACCAAGGATTGAATATTGATTTATCAGATAAGTTTGGGAATACTCCGTTGTTTGAAGCCATAAAGAATGGACATGAAGAAGTAGCTTCTTTGCTTGTAAATAAAGGGGCCACTCTTATTATTGAAGATGTTGGAAGTTTTCTATGCATGACTGTTGCAACGAAGGAACAAGGCCTTTTAAGAAAGCTTTTAGCCTATGGTATAGATCCAAATTCTAGAAATTATGATCAACGAACAGCTCTTCACATAGCTGCCTCAGAGGGTTTGTTCACAGTTGCCGAAATGCTCATAGAAGCAGGAGCAAGTGTTTTAGCAACGGACAGGTGGGGATATACACCACTTGATGATGCTCGCATAGGAGGAAATAGGAACTTGATCAGATTGCTTGAAGTGGCAAAAATTTCTCAGCTTGCTGAGATATCAAATGAAATAACAGAAACGCTGGTCTCGCCATCAAGAGATGGAAGTCTGAAAAAGAAATGCAAAGTATTTCCTTTCCACCCATGGGATCACAAAAAGGAAGGAAGAGTGGGAACAGTCCTATGGGTTCCTGGAAGCATTGAAGAGCTAATAAAGATGGCAAGAGAACAGTTAAAATATCCCAATGGTTCCTTCATTTTATCTCAGCATGGTGGTAGAATTCTTGATGTAGACTTGATCAACAATGATGAGCATATATTTCTAATAAGTGAACCACACACTGAGGGGCAAATAATAGAAGAATGTTCTGCACGTCCCCAGTGA 2469 0.4115 MLTKLMSFHRRTRRSPEEEEEDDDDDEEEEDRSFGFSVNPTHLCRDFFIHPHNRWYVVWKHFILIWAVYSSFFTPMEFGFFRGLPEEIFFLDIAGQFAFLLDIIIRFFLAYRDTSSNSWVYNHRQIAKRYLKSRFVLDFLSCLPWDYIYKAAGRKEPVRYLLWIRLWRACRVIEFFYRLEKDLRIDYRFTRIVKLLVVELYCTHTAACIFYYLATTLPPSKEGYTWIGSLTMGDYSYSDFRHISLWRRYVTSLYFAIVTMVTVGFGEIHAVNVREMIFVMIFVSSDMILGAYLLGNMTALVVKGSRTEKFRDKMSELIKYMNKNNLDKQITKEIRGHLRLQYDRSDTEAAIDEDIPVSIRTKISMNLHEQFIQKVHLFKGCSSGFIKHVAINVHEEFFLLGEVIMEQGDVVDQLYLVCHGELDGLRKENDEREELVKQYQTYSSFGEVSFLCNLPQPYMVRAREFCKVLRLDKISFTETLKTYFLDGRVILQNLLEGKDSGLQYKLLESDFTLTIGNRETELAMRINYAAYEGDFYLLKHWIESGLDPNRTDYDGRSPLHISASKGHVDISRFLIDQGLNIDLSDKFGNTPLFEAIKNGHEEVASLLVNKGATLIIEDVGSFLCMTVATKEQGLLRKLLAYGIDPNSRNYDQRTALHIAASEGLFTVAEMLIEAGASVLATDRWGYTPLDDARIGGNRNLIRLLEVAKISQLAEISNEITETLVSPSRDGSLKKKCKVFPFHPWDHKKEGRVGTVLWVPGSIEELIKMAREQLKYPNGSFILSQHGGRILDVDLINNDEHIFLISEPHTEGQIIEECSARPQ 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2224 822 Pfam KHA, dimerisation domain of potassium ion channel 734 803 IPR021789 -
Mibi02g2224 822 Pfam Cyclic nucleotide-binding domain 400 483 IPR000595 -
Mibi02g2224 822 Gene3D Jelly Rolls 366 485 IPR014710 -
Mibi02g2224 822 Pfam Ion transport protein 58 299 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi02g2224 822 PRINTS EAG/ELK/ERG potassium channel family signature 201 211 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi02g2224 822 PRINTS EAG/ELK/ERG potassium channel family signature 92 102 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi02g2224 822 PRINTS EAG/ELK/ERG potassium channel family signature 249 266 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi02g2224 822 PRINTS EAG/ELK/ERG potassium channel family signature 293 302 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi02g2224 822 PRINTS EAG/ELK/ERG potassium channel family signature 460 468 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi02g2224 822 Pfam Ankyrin repeats (many copies) 638 690 IPR002110 GO:0005515
Mibi02g2224 822 Gene3D Helix hairpin bin 305 365 - -
Mibi02g2224 822 Gene3D - 57 303 - -
Mibi02g2224 822 Gene3D - 519 618 IPR036770 -
Mibi02g2224 822 PANTHER POTASSIUM CHANNEL AKT1 29 805 IPR045319 GO:0005249|GO:0006813
Mibi02g2224 822 ProSiteProfiles Ankyrin repeat profile. 554 586 IPR002110 GO:0005515
Mibi02g2224 822 MobiDBLite consensus disorder prediction 1 34 - -
Mibi02g2224 822 ProSiteProfiles cAMP/cGMP binding motif profile. 377 497 IPR000595 -
Mibi02g2224 822 ProSiteProfiles Ankyrin repeat profile. 587 619 IPR002110 GO:0005515
Mibi02g2224 822 SUPERFAMILY cAMP-binding domain-like 305 495 IPR018490 -
Mibi02g2224 822 SMART cnmp_10 377 495 IPR000595 -
Mibi02g2224 822 ProSiteProfiles Ankyrin repeat region circular profile. 651 683 - -
Mibi02g2224 822 SUPERFAMILY Voltage-gated potassium channels 50 302 - -
Mibi02g2224 822 ProSiteProfiles Ankyrin repeat profile. 651 683 IPR002110 GO:0005515
Mibi02g2224 822 SMART ANK_2a 684 713 IPR002110 GO:0005515
Mibi02g2224 822 SMART ANK_2a 554 583 IPR002110 GO:0005515
Mibi02g2224 822 SMART ANK_2a 521 550 IPR002110 GO:0005515
Mibi02g2224 822 SMART ANK_2a 587 616 IPR002110 GO:0005515
Mibi02g2224 822 SMART ANK_2a 651 680 IPR002110 GO:0005515
Mibi02g2224 822 PRINTS Ankyrin repeat signature 555 570 IPR002110 GO:0005515
Mibi02g2224 822 PRINTS Ankyrin repeat signature 667 681 IPR002110 GO:0005515
Mibi02g2224 822 ProSiteProfiles KHA domain profile. 735 821 IPR021789 -
Mibi02g2224 822 CDD CAP_ED 377 491 IPR000595 -
Mibi02g2224 822 SUPERFAMILY Ankyrin repeat 525 704 IPR036770 -
Mibi02g2224 822 ProSiteProfiles Ankyrin repeat region circular profile. 554 586 - -
Mibi02g2224 822 FunFam Potassium channel KAT2 365 501 - -
Mibi02g2224 822 MobiDBLite consensus disorder prediction 18 32 - -
Mibi02g2224 822 ProSiteProfiles Ankyrin repeat region circular profile. 587 618 - -
Mibi02g2224 822 Pfam Ankyrin repeats (3 copies) 528 614 IPR002110 GO:0005515
Mibi02g2224 822 Gene3D - 619 717 IPR036770 -
Mibi02g2224 822 FunFam Potassium channel SKOR 57 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2224 Mibi-ChrMibi02 25095311 25103446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2224 47 683 Ion Channels AT5G37500 58.877 0.0 822