LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi02g2223	ATGGCCGTCGTCCGTGATCGCCGCCACCTCAACCTCCGCCTCCCCTTACCGGAACTCTCCGAACGCCGCCCTCGCTTCCCCCTCCCCCTCCCACCCTCCACCACCAACTCCGTCTCCGCCGGCGCCGGCACCGCCGATTTCTCCGCCGCCGACTTCGAAAAGCTCCAAGTCCTCGGCCACGGCAACGGCGGCACCGTCTATAAGGTCCGCCACAAATGCACCTCCGCCGTCTACGCCCTCAAGGTCGTCCACGGCGACTCCGATCCGATCAACCGCCGCCAACTCCGGCGAGAGATGGACATCCTCCGCCGCACCGACTCTCCCTACGTCGTCCGGTGCCACGGATTCTTCGAGAAACCGTCGGGTGACGTGGCGATCGTCATGGAGTATATGGATTTGGGGACGCTAGACACTTTGTTGAAGAAGAACGGCACGTTTTCGGAATTCCAACTCGCTGCGGTGGCGCGTCAGGTTTTGAACGGCCTGAGTTATCTCCACGCGCACAAGATCGTCCACCGTGATATCAAGCCGTCAAATCTATTGGTGAATCACAAGATGGAAGTGAAGATTGGGGACTTTGGTGTTAGCAAAATCATGTGCCGCACGCTGGACGCGTGTAATTCCTATGTTGGCACGTGCGCGTACATGAGCCCCGAGCGGTTCGACCCGGATAGGTATGGCGGGATTTATGACGGGTATTCGGGTGATATATGGAGTTTGGGTTTGACACTTTTTGAACTTTACGTGGGTCATTTTCCCTTTTTGCCCGCGGGTCAGAGGCCCGATTGGGCGACATTGATGTGTGCGATTTGCTTCGGGGACCCGCCGAGTTTGCCGGGTCAGGCGTCAGGAGAGTTTCGGAGCTTCATAGATTGTTGCTTGAAGAAGGAATCAAGTGATAGGTGGAGTGCTTCTCACCTTTTGAATCATCCGTTTCTTTTGAAGAAGTCCGGGGATTGGTAG	963	0.5701	MAVVRDRRHLNLRLPLPELSERRPRFPLPLPPSTTNSVSAGAGTADFSAADFEKLQVLGHGNGGTVYKVRHKCTSAVYALKVVHGDSDPINRRQLRREMDILRRTDSPYVVRCHGFFEKPSGDVAIVMEYMDLGTLDTLLKKNGTFSEFQLAAVARQVLNGLSYLHAHKIVHRDIKPSNLLVNHKMEVKIGDFGVSKIMCRTLDACNSYVGTCAYMSPERFDPDRYGGIYDGYSGDIWSLGLTLFELYVGHFPFLPAGQRPDWATLMCAICFGDPPSLPGQASGEFRSFIDCCLKKESSDRWSASHLLNHPFLLKKSGDW	320

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi02g2223	320	Pfam	Protein kinase domain	52	313	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi02g2223	320	Gene3D	Phosphorylase Kinase; domain 1	33	127	-	-
	Mibi02g2223	320	CDD	PKc_MAPKK_plant_like	50	313	-	-
	Mibi02g2223	320	SUPERFAMILY	Protein kinase-like (PK-like)	51	314	IPR011009	-
	Mibi02g2223	320	ProSitePatterns	Protein kinases ATP-binding region signature.	58	81	IPR017441	GO:0005524
	Mibi02g2223	320	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	170	182	IPR008271	GO:0004672\|GO:0006468
	Mibi02g2223	320	Gene3D	Transferase(Phosphotransferase) domain 1	128	318	-	-
	Mibi02g2223	320	ProSiteProfiles	Protein kinase domain profile.	52	313	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi02g2223	320	PANTHER	MITOGEN-ACTIVATED KINASE KINASE KINASE	45	315	-	-
	Mibi02g2223	320	FunFam	Mitogen-activated protein kinase kinase	30	128	-	-
	Mibi02g2223	320	FunFam	Mitogen-activated protein kinase 2	133	319	-	-
	Mibi02g2223	320	SMART	serkin_6	52	313	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi02g2223	Mibi-ChrMibi02	25069238	25070200	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi02g2223	1	313	MAP Kinase Kinase Gene Family	AT1G73500	66.561	8.95e-143	404

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE7	Mibi02g2223		Pkinase	1.6e-63	CL0016