Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2207 ATGCATTCAATTTCAATCCAAAGTCCCTCTTATTATGCTATCCACAACCACTCTTTATCAAAGTTCAATCGAATTTCTAACGGTTTGGTTGGATCCAATGTGCTATTTGCCTCCAGCGCACCGCCGGCTTTTCCTAGCTTCGGATTGCGTGCTATTAATTCTGAATTCTTGCCCAAAATTAGTTATTTTCAGAACCCAAGTTTTGTTTTCGCACGCAGGAAACCCTTGCGCTGTCTTGTAGTAGCCAGAGCCACTGGAAAAGACTACTATTCCACTTTGAAAGTTAGCAAGAATGCTTCTTTGCAAGAGATTAAGAGTGCTTATAGAAAACTGGCCCGTAAGTATCATCCAGATATGAATAAGAGCCCCGGGGCGGAAGAGAAGTTCAAGGAGATAAGTGCTGCATATGAGGTTCTATCAGATGATGAGAAAAGATCTTTATATGATCGCTTTGGTGAGGCAGGTCTACAAGGAGAAAATGGATGGTCGGCTAGTGCTTCAGGGGTTGATCCTTATGATATATTTGATGCATTCTTTGGTGGTTCGGATGGTCTATTTGGAGGTGGTGATGAACTAGGAGGAATGAACTTCAATTTCACAAACAACAGAAAACGTGGTCTTGATATTCGGTATGACCTTTACTTGAGCTTTGAGGAATCTATTTTTGGGGGAAGGAAAGAAATTGAAGTTCCTTGTTTTCAGACATGTACTGATTGTGATGGTACAGGAGCTAAATCAAGGGATTGCATTAAACCATGCGCAAATTGTGGTGGCAGAGGAGGAGAGATGAAAAGTCAAAGAACACCCTTTGGAGTAATGTCTCAGGTTTCAACCTGTTCTAAGTGCCGTGGTCTTGGCAAGATAGTTACTGATAACTGTCAAGGGTGCGGTGGCAGTGGGATGGTGCAGTCTAAACAAAGAATGGAGATGGTCATTCCTCCTGGTGTTAATGACGGAGCCACAATTCAAATTCGAGGAGAAGGGAATCCGGATAAGAATCGGGGTACAGTTGGTGACCTTTATATCGTCATCCATGTAGATGAAAAAGATGGAGTTTGGAGGGAAGGTCTTCATTTGTACTCAAAGATAAATATTGACTTCACAGAGGCGATTCTAGGATCTGTTAAGAAGGTAGATACTGTTGAGGGTTTAAGGGACCTCCAAATTCCTTCTGGGATTCAACCAGGAGATTCTCTGAAGTTATCACGTATGGGAGTTCCTGACATGAATAAACCATCTGTTCGAGGTGATCATTACTTCATCGTGAATGTTCTCATCCCTAAAAACATAAGTGTTGCTGAACGTGTACTAGTTGAGGAATTGGCTTCACTCAGAGCCTCTGGCAAAGATACCTCAATTTCTTTTAATAACATTGGGACATCTAAAGGGGAAGCAAATGATTTCAAAAAGACGCACCCAAAGCAACATTCAAGCATGGGAAGGAAACGTGGTTCTCTATGGAGATCAATCAAGAATTTCTTAAGGGGTGGACAATCTGAAGAGAAGTTTGCATCTATGAGCTTGGATTCCTCAGCAGCATTGTGGAGATTTGGGAAGTCAAACTCATCAAACCATAATTATTTTATATTTGGTTTCACTATAAGTTGTATTATTTTCTATATATCTAGGTATTATTATGCTTTGTTCGATAAAGGAAGCCGGCCCTTTACTCGTGGAACACCTAACGAAAGGACATTAAAAGGAAGAGATTTTTCTGTTTGA 1722 0.4094 MHSISIQSPSYYAIHNHSLSKFNRISNGLVGSNVLFASSAPPAFPSFGLRAINSEFLPKISYFQNPSFVFARRKPLRCLVVARATGKDYYSTLKVSKNASLQEIKSAYRKLARKYHPDMNKSPGAEEKFKEISAAYEVLSDDEKRSLYDRFGEAGLQGENGWSASASGVDPYDIFDAFFGGSDGLFGGGDELGGMNFNFTNNRKRGLDIRYDLYLSFEESIFGGRKEIEVPCFQTCTDCDGTGAKSRDCIKPCANCGGRGGEMKSQRTPFGVMSQVSTCSKCRGLGKIVTDNCQGCGGSGMVQSKQRMEMVIPPGVNDGATIQIRGEGNPDKNRGTVGDLYIVIHVDEKDGVWREGLHLYSKINIDFTEAILGSVKKVDTVEGLRDLQIPSGIQPGDSLKLSRMGVPDMNKPSVRGDHYFIVNVLIPKNISVAERVLVEELASLRASGKDTSISFNNIGTSKGEANDFKKTHPKQHSSMGRKRGSLWRSIKNFLRGGQSEEKFASMSLDSSAALWRFGKSNSSNHNYFIFGFTISCIIFYISRYYYALFDKGSRPFTRGTPNERTLKGRDFSV 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2207 573 Gene3D DnaJ domain 85 187 IPR036869 -
Mibi02g2207 573 Pfam DnaJ C terminal domain 209 427 IPR002939 -
Mibi02g2207 573 CDD DnaJ 88 141 IPR001623 -
Mibi02g2207 573 ProSiteProfiles Zinc finger CR-type profile. 223 305 IPR001305 GO:0031072|GO:0051082
Mibi02g2207 573 Gene3D - 236 300 - -
Mibi02g2207 573 SUPERFAMILY Chaperone J-domain 83 195 IPR036869 -
Mibi02g2207 573 ProSiteProfiles dnaJ domain profile. 88 152 IPR001623 -
Mibi02g2207 573 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 51 446 - -
Mibi02g2207 573 Gene3D - 206 342 - -
Mibi02g2207 573 Gene3D - 353 444 - -
Mibi02g2207 573 PRINTS DnaJ domain signature 144 163 IPR001623 -
Mibi02g2207 573 PRINTS DnaJ domain signature 108 123 IPR001623 -
Mibi02g2207 573 PRINTS DnaJ domain signature 124 144 IPR001623 -
Mibi02g2207 573 PRINTS DnaJ domain signature 90 108 IPR001623 -
Mibi02g2207 573 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 223 303 IPR036410 -
Mibi02g2207 573 Hamap Chaperone protein DnaJ [dnaJ]. 85 493 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mibi02g2207 573 Pfam DnaJ domain 88 149 IPR001623 -
Mibi02g2207 573 CDD DnaJ_zf 236 300 IPR001305 GO:0031072|GO:0051082
Mibi02g2207 573 CDD DnaJ_C 208 430 - -
Mibi02g2207 573 FunFam Molecular chaperone DnaJ 228 305 - -
Mibi02g2207 573 SUPERFAMILY HSP40/DnaJ peptide-binding domain 354 435 IPR008971 GO:0006457|GO:0051082
Mibi02g2207 573 ProSitePatterns Nt-dnaJ domain signature. 129 148 IPR018253 -
Mibi02g2207 573 Pfam DnaJ central domain 236 300 IPR001305 GO:0031072|GO:0051082
Mibi02g2207 573 SUPERFAMILY HSP40/DnaJ peptide-binding domain 203 347 IPR008971 GO:0006457|GO:0051082
Mibi02g2207 573 TIGRFAM DnaJ_bact: chaperone protein DnaJ 88 443 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mibi02g2207 573 SMART dnaj_3 87 144 IPR001623 -
Mibi02g2207 573 FunFam Chaperone protein dnaJ A6 chloroplastic 85 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2207 Mibi-ChrMibi02 24840539 24847397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2207 82 149 C2H2 Transcription Factor Family AT1G74250 41.892 4.41e-08 54.3