Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2206 ATGCAGCAGCCTCACAGCCTCCCTCTCTTCCTCCTCATTCTCCTCCCTCTCCTCGCCACCTCAGATCCATCCTCCGAACGATCCGCCCTCCTCTCTCTCCGTTCCTCCGTCGGAGGCCGTACCCTCCTCTGGAACATCACCCAACCAGATCACTGCACGTGGCCTGGCGTCCAATGCGACAATTACCGCCAAGTCGTTGAGCTTCACCTCCCCGGCGTTGGCCTCTCCGGAAAATTACCTAACGGCATTTTCGCTAACCTCACTCATCTTTTGACTCTCAGTCTCCGCTTTAACGCCTTGACTGGCAGTCTACCTTCAGATCTCGCTTCTTGTGTCCACCTTAGGAATCTCTACTTGCAGAGGAACTTCCTCTCTGGTGAGATTCCTGTGTTTTTGTCCTCTTTACCTGATATGGTGAGACTTAATTTGGGGTATAATAATTTCTCTGGTGTGATTCCGCTTGATTTTAACAAGCTTGTGAGGTTGAGGACTCTGTATCTTGAGAATAATCGGCTTTCTGGTGGAATCCCCGCGTTGAAATTGGAGAATCTCGAGCAGTTCAATGTGTCTAACAATTTGTTGAATGGCTCTGTACCTGTGAAGTTACAGACATTTTCTGAGGATTCGTTTCTGGGGAATTCGCTGTGTGGGAAGCCCCTTAAGCTTTGCCCTGGAGAAGGAGCCGCAATATCTCCCTCGGGTGAGATTGAGAACAATGACAATAATGGAGGGGGGAAGAAGAAGAAGAAATTGTCTGGTGGGGCCGTTGCTGGAATAGTCATTGGATCTGTGGTGCTTCTATTGTTGATTGTGTTTGCTTTGATTCTCCTTTGCCGAAAGAAGAGCAACAAGACGTCGAGGTCTGTCGACATTGCTACTATGAAGCATCCAGAAACGGAAATTCCAGGGGATAAACCTGTTCCAGATGTGGAGAATAACGGACACAGTAATGGGTATTCTGTAGCTGCTGTGGCTGCAGCGGCCATGACTGGAAATGGCAGATCAGAATCGAATAACAATGAGGGTGTGAAGAAGTTGTCATTTTTTGGTAATGCACCGAGGGTGTTTGATCTGGAAGATTTGCTTAGAGCTTCGGCGGAGGTTTTGGGGAAAGGGACGTTTGGAACAGCGTATAAGGCGGTTTTGGAGTCTGGGCCGGTGGTGGCTGTGAAGAGGTTGAAGGATGTGACAATTTCTGAGAAGGAATTCAAGGAGAAGATTGAATTGGTGGGAGCGATGGATAATGAGAATTTGGTCCCTCTCAGAGCTTATTATTTCAGCAGGGATGAGAAACTTCTTGTCTATGATTACATGCCCACGGGAAGCTTATCTGCACTTTTGCACGGAAACAAGGGGGCTGGTAGGACGCCGTTGAATTGGGAAATCAGATCAGGAATTGCGCTAGGAGCTGCTCGGGGCATTGAGTACTTACATTCACAGGGATCTACTGTTTCTCATGGAAACATAAAATCGTCCAACATCCTCCTTACCAAGTCCTATGATGCCAGAGTGTCTGATTTTGGCCTGGCACATCTTGTTGGTCCCTCCTCCACTCCCAATCGGGTTGCTGGCTACCGTGCACCAGAAGTTACTGATCCTCGCAAAGTTTCTCAGAAGGCAGATGTCTACAGCTTTGGAGTGTTGCTCTTGGAACTTCTGACTGGAAAGGCTCCCACACATTCTCTCTTAAATGAGGAAGGAGTAGACCTCCCAAGATGGGTTCAATCTGTTGTTAGAGAAGAGTGGACTTCTGAAGTGTTTGATCTCGAGCTCCTAAGGTATCAGAATGTTGAGGAGGAGATGGTTCAATTATTGCAGCTTGCTGTAGATTGTGCAGCTCAATATCCTGATAAGCGCCCTTCAATGTCTGAGGTGAGACAACGTATAGAAGAGCTACGTCGCTCAAGCCTGAAAGAGGAACAAGACCAAATTCAGCAGCCTGATCTGATCAATATAATGTAG 1962 0.4776 MQQPHSLPLFLLILLPLLATSDPSSERSALLSLRSSVGGRTLLWNITQPDHCTWPGVQCDNYRQVVELHLPGVGLSGKLPNGIFANLTHLLTLSLRFNALTGSLPSDLASCVHLRNLYLQRNFLSGEIPVFLSSLPDMVRLNLGYNNFSGVIPLDFNKLVRLRTLYLENNRLSGGIPALKLENLEQFNVSNNLLNGSVPVKLQTFSEDSFLGNSLCGKPLKLCPGEGAAISPSGEIENNDNNGGGKKKKKLSGGAVAGIVIGSVVLLLLIVFALILLCRKKSNKTSRSVDIATMKHPETEIPGDKPVPDVENNGHSNGYSVAAVAAAAMTGNGRSESNNNEGVKKLSFFGNAPRVFDLEDLLRASAEVLGKGTFGTAYKAVLESGPVVAVKRLKDVTISEKEFKEKIELVGAMDNENLVPLRAYYFSRDEKLLVYDYMPTGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQGSTVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVRQRIEELRRSSLKEEQDQIQQPDLINIM 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2206 653 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
Mibi02g2206 653 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Mibi02g2206 653 Pfam Protein kinase domain 366 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2206 653 FunFam pollen receptor-like kinase 1 332 437 - -
Mibi02g2206 653 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Mibi02g2206 653 Gene3D Phosphorylase Kinase; domain 1 328 437 - -
Mibi02g2206 653 Gene3D Ribonuclease Inhibitor 180 226 IPR032675 -
Mibi02g2206 653 Coils Coil 622 642 - -
Mibi02g2206 653 FunFam Probable inactive receptor kinase At1g48480 438 641 - -
Mibi02g2206 653 PANTHER OS05G0588300 PROTEIN 9 636 - -
Mibi02g2206 653 SUPERFAMILY L domain-like 42 202 - -
Mibi02g2206 653 Gene3D Transferase(Phosphotransferase) domain 1 438 651 - -
Mibi02g2206 653 FunFam Probable inactive receptor kinase RLK902 23 179 - -
Mibi02g2206 653 MobiDBLite consensus disorder prediction 231 250 - -
Mibi02g2206 653 SUPERFAMILY Protein kinase-like (PK-like) 367 634 IPR011009 -
Mibi02g2206 653 ProSiteProfiles Protein kinase domain profile. 363 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2206 653 Gene3D Ribonuclease Inhibitor 23 179 IPR032675 -
Mibi02g2206 653 CDD STKc_IRAK 369 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2206 Mibi-ChrMibi02 24817735 24820172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2206 20 648 Receptor kinase-like Gene Family AT1G48480 65.211 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi02g2206 Pkinase 3.6e-38 CL0016