Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2205 ATGGTCTTCAAAGGTAGGTTCTTCAACTTCAAGAAATCCACCGACTCTTCTTCTTCTAGCCCCGATGCTTCATCCCCCAATAGCCCCCGATCATTCGCCTCCAATTCCCCCACCACATCCCAAAACAACAAGAAGAAGCCCAAATCATCTTCTAAGGATAACCCTCGCATCTCTCACTCTCCTTCTCCTTCTCCCACTCCCTTCCCCGATCCTTCCCGCCCTAACCCACTCAACAACAAGGATCATACCAAAGTATTCGACACTCAGCCTCCCTCCAAGCCAATCTCCGGCGCCGAATTCGGTTCCGGTCTGAAGCCCAAGGCGGAGCCGCCGTCGTCGGCGGCTTCGGTTTCGCCGATTTTGGCATCTTCGCTTGGATTGAATAGGATAAAGACGAGATCAGGGCCACTGCCGCAGGAGAGTTTCTTTGGGTTTAGGAATGATAAAGGTTCGTCACTTGGTGTGAGTAATCTATCGAAGCCTGGTGGTGGTGGTGATGGGAATTTGAAGGAGACTGTGAATTACCGTAAGGTGGCGTTTCAAGAGAGCTCTGGAAGTGGGAATTGGGTTGATAATGGAAGCAATTCGGATAGTATGTCAACTGGGAGTGGTCCGTCCAGGGACCAGAGCCCTAATGTGTTGCCACGGTCGCGGTTACAGAACGCCGAATCGTCGGCAGAATCAGGGAGAAAAGAATCGACTCGCTTTCAGTCTGAAGGCTTAGGAAGTGCAGATGTTTGCACTCCAGAGACAGCATATGATTATGAGAACCCAAAGGAGTCTGAATCTCCTCGTTTTCAAGCATTATTACGTGTTACAAGTGCACCAAGAAAGAGGTTTCCTAATGACATTAAGAGTTATTCTCATGAGCTGAATTCCAAAGGTGTTGTTCGTCCTTTTCCATTTTGGAAGGCTCGAAGATTAAATAACTTGGAGGAGATCTTGGTTGTAATTCGGGCCAAATTTGATAAAGAAAAGGAAGAAGTGAATTCTGAGCTGGCTATTTTTGCGGCTGACCTGGTTGGAATTCTTGAAAAAAATGTGGATACTCATCCTGAGTGGCAAGAGACAATTGAGGACTTGCTAGTTTTGGCTAGGAGCTGTGCTATGACTTCTCCTGGGGAGTTTTGGCTTCAGTGTGAAGGAATTGTTCAGGAATTGGATGATAAGCGTCAAGAACTTCCCCCCGGAATGCTTAAGCAGCTTCACACACGAATGCTCTTCATTCTTACCAGGTGTACAAGGTTATTGCAATTCCACAAGGAAAGTGGTTTGGCAGAGGATGAACATGTGTTTAATCTCCACCAATCTAGAGTTTTGCACTCTGCTGAAAAACGGATTCCTCCTGGTTTGGGAAGGGATGAAAAAAGTTTGAGCGCTGCAAAGGCCTCAAAGGTGTTGAAAGCTTCTGCTAAAAAGTCTTATAGTCAGGAGCAGCGTAGCTTGGAATTGAAGAAAGATGCTGTGATGCCGGAAAAACTTCCACTTCGTGCTGGTGACACTTCAAAACAAGATTCTTTTGCAGGCATGGATCGGATGGGTTCTTGGAAGAAATTCCTATCTCCAGCAAGCAAAAGCCCTAAAGAACCCGCGCAGATGAAGGACCAGAACCTTGGAAGGGTTGAACCTTCAAAGCCATCAATTAACAAGAGATCAAACTCTGATGTGGATCTGTCTGCCCCTAAGCCATCTGAGCTTATTAAGGATTCCCATGAACATGCTTCGAGACACCAACACAAAGCTTCTTGGGGCTACTGGGGTGAGCATCAAGGCATTGTTGAGGAGAACTCGATAATCTGTCGTATATGTGAGGAGGAAGTTCCTACGTCACATGTTGAAGAACATTCAAGAATTTGTGCAATTGCTGATAGATGTGATCAGAAGGGTCTGAGTGTCAATGAGCGCCTTGTCAGAATTGCTGAAACTTTAGAAAAGATGATGGAATCATGTATGCAGAAGGATATCCAGCAAATAGTGGGAAGTCCTGATGTGGGAAAGGTTTCAAATTCGAGTATGACTGAAGAATCTGATGTCCTCTCTCCAAAACTTAGTGATTGGTCTCGAAGAGGCTCAGAGGATATGTTAGACTGTTTCCCTGAAGCTGATAATTCTGCTTTTATGGATGACCTGAAGGGACTACCCCCAATATCATGCAAAACTCGCTTTGGTCCCAAGTCTGACCAAGGTATGGCAACTTCATCTGCAGGGAGCATGACTCCCAGGTCTCCCTTAATCACGCCAAGGACAAGTCAGATTGATTTACTCTTGGCAGGGAAGGGTGCTTATTCAGAGCATGATGATTTTCCACAGATGAATGAACTTGCTGATATAGCACGGTGTGTAGCAAATGCTCCTCTGGATGATGATCGCTCAACATCATACCTATTATCTTGTCTTGAAGATTTGCAAGTTGTGGTGGACAGAAGAAAATTTGATGCACTCACAGTGGAGACCTTTGGAGCGCGCATTGAGAAGTTGATACGGGAAAAGTATTTGCAGCTTACTGAGATGGTGGAGGATGAAAAGATAGACATAACGAGCACTGTTATTGATGAAGATGCTCCCCTGGATGATGATGTGATACGTAGCTTGAGAACAAGCCCTATCCATTCTTCAAAAGATCGCACTACAATTGATGATTTTGAGATTATAAAACCTATTAGTCGGGGGGCATTTGGACGGGTTTTCTTGGCTAAAAAGAGAATAACTGGGGATCTTTTTGCAATAAAGGTTCTTAAGAAGGCAGATATGATCCGTAAGAATGCCGTGGAAAGTATATTGGCTGAACGTGATATCTTAATTACAGTGCGCAATCCTTTTGTGGTTCGCTTCTTCTATTCATTTACATGTAGTGAAAACTTGTATCTTGTCATGGAATATCTTAATGGAGGTGACCTCTATTCGCTATTAAGGAATTTAGGCTGCCTTGATGAGGAAGTTGCTCGTGTATATATTGCTGAAGTGGTGCTTGCGTTGGAATATTTGCATTCACTTAGGGTGGTTCATCGTGACTTGAAGCCAGACAATTTATTGATTGCACATGATGGTCATATTAAGTTGACGGATTTTGGGCTTTCAAAAGTAGGTCTAATCAACAGCACTGATGATTTGTCTGGTCCAGCAGTGAGTGGGACATCCCTACTTGGTGAGGATGAGCCTCAGTTATCTACATCTGAGCATCAAAGTGAAAGAAGGAAGAATCGTTCTGCTGTGGGTACACCTGATTATTTAGCACCGGAGATACTCTTGGGAACTGGACATGGGTATACTGCAGATTGGTGGTCTGTTGGCGTTATTTTATTTGAATTGCTTGTTGGCATTCCACCTTTCAATGCAGAGCATCCTCAGATGATATTTGATAATATCCTTAATCGTAATATACCTTGGCCCCGTGTGTCAGAAGAAATGAGTCCTGAAGCACGTGATCTTATTGATCGGTTACTGACTGAAGATCCTAATCAGAGACTTGGAGCCAGGGGAGCATCAGAGGTGAAGCAGCATATTTTCTTCAAGGATATAAACTGGGATACTCTTGCCAGGCAGAAGGCTGCATTCGTGCCTTCTTCTGAGAGTGCCCTGGATACGAGTTATTTCACGAGCCGGTATTCATGGAATGCATCTGATGGTCTCGTGTATCCTGCTAGTGACATTGAAGAATACAGTGATGCTGATAGCTTAAGTGGCAGTAGTAGTTGCTTGAGCAATCGTCAAGATGAAGTGGGAGATGAATGTAGTGGTCTTGCAGAGTTTGAGCCTGGTTCCTCTGTCAATTACTCCTTTAGTAATTTTTCCTTCAAGAACCTCTCCCAGCTTGCATCCATCAACTATGATCTTCTCACTAAGGGATTGAAAGATGACCCACCTCCAAATTCTAGTGCATAA 3882 0.4446 MVFKGRFFNFKKSTDSSSSSPDASSPNSPRSFASNSPTTSQNNKKKPKSSSKDNPRISHSPSPSPTPFPDPSRPNPLNNKDHTKVFDTQPPSKPISGAEFGSGLKPKAEPPSSAASVSPILASSLGLNRIKTRSGPLPQESFFGFRNDKGSSLGVSNLSKPGGGGDGNLKETVNYRKVAFQESSGSGNWVDNGSNSDSMSTGSGPSRDQSPNVLPRSRLQNAESSAESGRKESTRFQSEGLGSADVCTPETAYDYENPKESESPRFQALLRVTSAPRKRFPNDIKSYSHELNSKGVVRPFPFWKARRLNNLEEILVVIRAKFDKEKEEVNSELAIFAADLVGILEKNVDTHPEWQETIEDLLVLARSCAMTSPGEFWLQCEGIVQELDDKRQELPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEHVFNLHQSRVLHSAEKRIPPGLGRDEKSLSAAKASKVLKASAKKSYSQEQRSLELKKDAVMPEKLPLRAGDTSKQDSFAGMDRMGSWKKFLSPASKSPKEPAQMKDQNLGRVEPSKPSINKRSNSDVDLSAPKPSELIKDSHEHASRHQHKASWGYWGEHQGIVEENSIICRICEEEVPTSHVEEHSRICAIADRCDQKGLSVNERLVRIAETLEKMMESCMQKDIQQIVGSPDVGKVSNSSMTEESDVLSPKLSDWSRRGSEDMLDCFPEADNSAFMDDLKGLPPISCKTRFGPKSDQGMATSSAGSMTPRSPLITPRTSQIDLLLAGKGAYSEHDDFPQMNELADIARCVANAPLDDDRSTSYLLSCLEDLQVVVDRRKFDALTVETFGARIEKLIREKYLQLTEMVEDEKIDITSTVIDEDAPLDDDVIRSLRTSPIHSSKDRTTIDDFEIIKPISRGAFGRVFLAKKRITGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCSENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPQLSTSEHQSERRKNRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQMIFDNILNRNIPWPRVSEEMSPEARDLIDRLLTEDPNQRLGARGASEVKQHIFFKDINWDTLARQKAAFVPSSESALDTSYFTSRYSWNASDGLVYPASDIEEYSDADSLSGSSSCLSNRQDEVGDECSGLAEFEPGSSVNYSFSNFSFKNLSQLASINYDLLTKGLKDDPPPNSSA 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2205 1293 FunFam probable serine/threonine protein kinase IREH1 879 968 - -
Mibi02g2205 1293 MobiDBLite consensus disorder prediction 725 744 - -
Mibi02g2205 1293 ProSiteProfiles AGC-kinase C-terminal domain profile. 1171 1275 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mibi02g2205 1293 ProSiteProfiles Protein kinase domain profile. 881 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2205 1293 MobiDBLite consensus disorder prediction 116 130 - -
Mibi02g2205 1293 CDD STKc_MAST_like 887 1175 - -
Mibi02g2205 1293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1000 1012 IPR008271 GO:0004672|GO:0006468
Mibi02g2205 1293 Gene3D Phosphorylase Kinase; domain 1 879 1199 - -
Mibi02g2205 1293 MobiDBLite consensus disorder prediction 10 45 - -
Mibi02g2205 1293 MobiDBLite consensus disorder prediction 664 685 - -
Mibi02g2205 1293 MobiDBLite consensus disorder prediction 664 680 - -
Mibi02g2205 1293 MobiDBLite consensus disorder prediction 1 249 - -
Mibi02g2205 1293 MobiDBLite consensus disorder prediction 542 559 - -
Mibi02g2205 1293 MobiDBLite consensus disorder prediction 469 488 - -
Mibi02g2205 1293 Pfam Protein kinase domain 881 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2205 1293 MobiDBLite consensus disorder prediction 726 744 - -
Mibi02g2205 1293 MobiDBLite consensus disorder prediction 177 227 - -
Mibi02g2205 1293 PANTHER SERINE/THREONINE-PROTEIN KINASE 574 1264 - -
Mibi02g2205 1293 Coils Coil 308 328 - -
Mibi02g2205 1293 MobiDBLite consensus disorder prediction 60 74 - -
Mibi02g2205 1293 MobiDBLite consensus disorder prediction 1042 1070 - -
Mibi02g2205 1293 MobiDBLite consensus disorder prediction 1056 1070 - -
Mibi02g2205 1293 SMART serkin_6 881 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2205 1293 Gene3D Transferase(Phosphotransferase) domain 1 965 1188 - -
Mibi02g2205 1293 SUPERFAMILY Protein kinase-like (PK-like) 878 1207 IPR011009 -
Mibi02g2205 1293 MobiDBLite consensus disorder prediction 518 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2205 Mibi-ChrMibi02 24797721 24814749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2205 106 1287 AGC Kinase Gene Family AT3G17850 69.186 0.0 1631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Mibi02g2205 Pkinase 1.2e-64 CL0016