Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2204 ATGGAACGCGATTTTCTGGGTTTGACCTCCAAGATTTGCTCGACGGCAACTATCAAAGAGGATGCTACTGATAAATCAAACGAACCAGTGAGGGGTTCAGGAATGCAGTGGTCGTTTTCAAACAAGGTTTCTGCTGTTCCTCAATTGTTGTCCTTTAAGACTTCTCCGGAAGATAGGACAAGAAAGACCACATCATCAACTGATGCTTTTGACTCTAACCAGAAACCATTCATGGGTGCGATCCAGAAGAGTTTGAGCATGGGAAGATTAGTAGGAAATGAACGTGGAATGACAGTATACCCTATGCAGCAAGTCGATACACTTTCGGGCTACCCTCAAGAAGCCAGAGCATTTTCAGTGTCCAACCAATCAAATCAGTGGAGTCCTGTTCTCCAATCTACTGTAGGGACCAATGTTCAGAACGTGGTCAATTCTGCCATAAAACCACACCCTCAAGGAGGAGTCCCTCTGATTGCCCCCGTGTCTGTTCTTCCATCAAATGGTTCCGTTGTTGGCACCACTGACTTAAGGAACTCATCGAAACCCTCTGGCCAACCTACTCAGCTGACCATTTTCTATGCTGGTTCAGTGTGTGTTTATGAAGACATATCTCCTGAGAAGGCTATTATGTTATTGGCTGGAAATGGGAGTACTCCGAATCAAAACAAGGCAGTTTCAACAGCTCCAGTGCAGACACCAATCTCCAAGCCATCCAAAGATGATGGGTTTATTGTAAGCCAATCCTACCATCCGCCTTTACCAAGTCCAATTCCCATGACCTTCCATGTTAGTTCTCAGCCTGTGGGAGGATCTCCTAGCACTAATGAACCTGCAATTGTGAGACCAGTAGCATCTTCCGCTGCCCCAAGTAGCCATCTGGAGTCTCCTAGTGTAGCTGGCTCTTCAAAATCTGCAGCCTCAAAAATTGGTTCACCTGTGGACTTGCCTCAGGCACGCAAAGCATCCTTGGCACGGTTCTTAGAGAAGCGCAAGGAAAGGGTGACAAGCGTATCACCATACTATATCAACAAGAAATCACCTGAATGTGGCAATCCAGGAACAGATGGTATTAGTTTCTCCATCACTTCCACTGGTTCCTGTCCCCTGCCTGCCATGAACTAG 1122 0.4652 MERDFLGLTSKICSTATIKEDATDKSNEPVRGSGMQWSFSNKVSAVPQLLSFKTSPEDRTRKTTSSTDAFDSNQKPFMGAIQKSLSMGRLVGNERGMTVYPMQQVDTLSGYPQEARAFSVSNQSNQWSPVLQSTVGTNVQNVVNSAIKPHPQGGVPLIAPVSVLPSNGSVVGTTDLRNSSKPSGQPTQLTIFYAGSVCVYEDISPEKAIMLLAGNGSTPNQNKAVSTAPVQTPISKPSKDDGFIVSQSYHPPLPSPIPMTFHVSSQPVGGSPSTNEPAIVRPVASSAAPSSHLESPSVAGSSKSAASKIGSPVDLPQARKASLARFLEKRKERVTSVSPYYINKKSPECGNPGTDGISFSITSTGSCPLPAMN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2204 373 MobiDBLite consensus disorder prediction 219 234 - -
Mibi02g2204 373 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 29 351 IPR040390 -
Mibi02g2204 373 ProSiteProfiles Tify domain profile. 182 217 IPR010399 -
Mibi02g2204 373 MobiDBLite consensus disorder prediction 288 308 - -
Mibi02g2204 373 SMART tify_2 182 215 IPR010399 -
Mibi02g2204 373 Pfam Jas motif 316 341 IPR018467 -
Mibi02g2204 373 MobiDBLite consensus disorder prediction 219 242 - -
Mibi02g2204 373 MobiDBLite consensus disorder prediction 52 74 - -
Mibi02g2204 373 Pfam tify domain 184 214 IPR010399 -
Mibi02g2204 373 MobiDBLite consensus disorder prediction 284 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2204 Mibi-ChrMibi02 24777260 24780838 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2204 35 346 Tify Gene Family AT3G17860 38.938 3.55e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mibi02g2204 tify 1.4e-13 No_clan