Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2187 ATGTGGATGGTGGGTTCTTATAATGAAGGGAGTGAGTTCAACATGCCTGATCATGCATTCAATGGAAGGAAGCTTAGGCCTTTAGTTCCAAGGCCACTGCCTTCACCTATTGCTCATCATGCTACAGATTTCTTCTCCCACTGTCACAATCTGGTGGGAGACCAAAGCAAGAGAGATCAGTTCAACAATAATATTACCCCATCACCAGTTGTGGCGAGCACAAGGTGGAATCCAACCCCAGAACAGCTGAGAGCTCTTGAAGAGTTGTATAGGAGAGGGACAAGAACTCCATCTGCAGAACAAATTCAACATATCACAGCACAGCTTCGGAGGTTTGGGAAGATTGAAGGAAAAAATGTGTTCTATTGGTTCCAGAATCACAAAGCCAGAGAGAGGCAAAAACGACGCCGTCAAGTAGTTGAATCATCAGCTGCAGTTGTAGAAGAGGAGCACCACCACTACAATAATCTTGATCATATTACTCTTGAAAAGAAAGACTTAGGCGCAAGTAGGACAGGGTTTGAAGTTGAACGGACTAGCAAGAACAACTGGGCACCCTCTTCAAACTGCAGTGTCCCTCTCTCAGAGGAATCTGTCTCAATACAACAAAGAGCAGCAAAAGCAGCTGCTGCAGCTGCAGCAGCAGCAGTTGCAGTTGCAGAGTGTAGAACAGAAGGTGGATGGGTTCAATTCCATGATGGAGAATTTCAACAACAACTTCAACAACAAAGAAGGAGCTTTATGGAAAGGAATGCCACGTGGCACATGTTACATCCTTCATCTTCTTGCCCTCCTCCTACTACACCTATTGTTACCACCACTTCTTCCTCTACAATTAATAGCATTATTGCCACTAATGCAGTCACATTAGTGGACCCAAAGCTCCTAAAGAACCATTGTGATAATATCTGCTTTTTCAATATTCCTCCTCTCACGGATGAAAATGGCGTCATTATCCACTCAAACAGTGAAGAAGATAATCATCATCGTCATCATAACAATAACAACCATGATGTGGAATCTCAAACCCTTCAACTTTTCCCATTAAGAAGTGGTGGAGGAGGAGGAGGAGGAGATAATGGCTGCAATAACATTAATAATCAGAAAGAGACAGAGATATCAGTATGCGCCATGGATTCCAACTCGAACCCTGCAAGCCACCAGTTCTTTGAATTCCTTCCATTGAAGAACTAA 1194 0.4347 MWMVGSYNEGSEFNMPDHAFNGRKLRPLVPRPLPSPIAHHATDFFSHCHNLVGDQSKRDQFNNNITPSPVVASTRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQVVESSAAVVEEEHHHYNNLDHITLEKKDLGASRTGFEVERTSKNNWAPSSNCSVPLSEESVSIQQRAAKAAAAAAAAAVAVAECRTEGGWVQFHDGEFQQQLQQQRRSFMERNATWHMLHPSSSCPPPTTPIVTTTSSSTINSIIATNAVTLVDPKLLKNHCDNICFFNIPPLTDENGVIIHSNSEEDNHHRHHNNNNHDVESQTLQLFPLRSGGGGGGGDNGCNNINNQKETEISVCAMDSNSNPASHQFFEFLPLKN 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2187 397 SUPERFAMILY Homeodomain-like 74 138 IPR009057 -
Mibi02g2187 397 SMART HOX_1 71 138 IPR001356 GO:0003677
Mibi02g2187 397 CDD homeodomain 74 135 IPR001356 GO:0003677
Mibi02g2187 397 FunFam WUSCHEL-related homeobox 4 73 140 - -
Mibi02g2187 397 Gene3D - 71 138 - -
Mibi02g2187 397 Pfam Homeodomain 73 133 IPR001356 GO:0003677
Mibi02g2187 397 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 57 392 IPR044555 GO:0003700|GO:0099402
Mibi02g2187 397 ProSiteProfiles 'Homeobox' domain profile. 79 134 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2187 Mibi-ChrMibi02 24592875 24595162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2187 1 397 Wox Gene Family AT3G18010 35.280 8.57e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mibi02g2187 Homeodomain 1.7e-19 CL0123