Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2171 ATGGGTGGTGGAACGACTCTCGTGGACGGCATTCGTCGCCTTTTTCAACGTCGGCCTTCTTCTTCAATAAACTCCTCCTCTCATGACGAATCTACTACCCACAATGCCGATCGCATTCCTAATTCCAACCATAACCACATGTTCGTCAGAAATTTGCGCGCCCAATTAGCCACTATTCCCAATTACGAGCGAGAGGAAGCCGATGATGGGGCCCAGGACGAACTCACCATTGAGGATGATTTTGATGTTTCTGGCTTGAAGCATATCAAGGTTCCCACACGTGCCTACTTCAAAGTTGCTTCCATGGATCCTTCCAGAAAGGCCACAGAAACAGAGTTCTTCACTGAGTATGGAGAGGCAAGTAGATATCAGGTCCAAGAAGTTATTGGAAAAGGAAGTTATGGTGTCGTAGGTTCTGCAATTGATACTCATACAGGGGAAAAGGTTGCAATTAAGAAAATTAATGATGTTTTTGAGCATGTATCAGATGCCACACGGATCCTAAGAGAGATTAAACTCCTTCGGTTGCTCCGGCATTCTGATATAGTACAAATCAAGCATATAATGCTTCCTCCTTCACGGCGAGAGTTTAAGGATATCTATGTGGTGTTTGAGTTGATGGAATCTGACCTTCATCATGTAATCAAGGCTAATGATGATCTTACACCTGAGCACCATCAATTTTTCTTGTACCAACTTCTTCGGGGCCTGAAATATATACATTCTGCAAATGTGTTTCATCGTGATTTAAAGCCCAAAAATATTCTTGCTAATGCTGATTGCAAACTGAAAATATGTGATTTTGGGCTTGCTCGAGTTTCCTTTAATGATGCACCATCTGCTATATTCTGGACCGACTATGTTGCGACTCGGTGGTATCGTGCGCCAGAATTATGTGGTTCTTTCTTCTCCAAATATACCCCCGCAGTTGATATTTGGAGCATCGGGTGCATATTTGCAGAACTGCTCTCTGGGAAGCCGTTGTTTCCCGGTAAAAATGTGGTGCACCAATTGGATCTCATGACTGATTTACTTGGTACTCCTCCCACTGAAACCGTCTCGAGGATTCGAAATGAGAAGGCTAGAAGGTACCTTAGTAACATGCGGAAAAAGCAACCAGTTCCCCTTTCTCAAAAGTTCCCTCATGCAGATCCATTGGCCCTTCGCCTACTGGAGCGCCTGCTTGCATTTGATCCTAAAGATCGTCCCACAGCTGAAGAGGCATTAAGTGATCCTTACTTTCGTGGTTTGGCAAATGCTGAGCGTGAACCAGCTTCTCCTCAACCGATTTCAAAACTTGAGTTTGAGTTTGAGAGAAGAAAATTGACTAAGGATGATGTTAGAGAGTTGATTTATCGAGAGATTCTAGAGTATCATCCTCAAATGCTCCAAGAATATCTGCGTGGTGGAGAGCAGACCAGCTTCATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTCGCACATCTTGAGGAGCATTATGGCAAAGGTGAACGAAGTACCCCTTTGCAGAGACAGCATGCCTCCTTGCCTAGAGAACGAGTACCTGCTCCTAATGGTGAAGCCGGTCAAAACAATGACATTGAAAGGCGAACTGCTGAGGCTGTCGCAACGACTCTTCACAGTCCTGATGGGACTGAAGCTGCACAAAATGGACCAAACCAAGTTGGTTCACGTAGCCTTATGAAGAGTGCCAGCATCAGTGCCTCCAAGTGTGTAGGCGGGAATCAAAGTAAAGATCCAGAGGGGGGGCCTATCGAAGAGGTGAACGATGAGGAAGTGGATGGGTTGGCAGAGAAGGTTGATGCTGTTCTTGTCTAG 1824 0.4534 MGGGTTLVDGIRRLFQRRPSSSINSSSHDESTTHNADRIPNSNHNHMFVRNLRAQLATIPNYEREEADDGAQDELTIEDDFDVSGLKHIKVPTRAYFKVASMDPSRKATETEFFTEYGEASRYQVQEVIGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHSDIVQIKHIMLPPSRREFKDIYVVFELMESDLHHVIKANDDLTPEHHQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAVDIWSIGCIFAELLSGKPLFPGKNVVHQLDLMTDLLGTPPTETVSRIRNEKARRYLSNMRKKQPVPLSQKFPHADPLALRLLERLLAFDPKDRPTAEEALSDPYFRGLANAEREPASPQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVPAPNGEAGQNNDIERRTAEAVATTLHSPDGTEAAQNGPNQVGSRSLMKSASISASKCVGGNQSKDPEGGPIEEVNDEEVDGLAEKVDAVLV 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2171 607 SUPERFAMILY Protein kinase-like (PK-like) 118 419 IPR011009 -
Mibi02g2171 607 MobiDBLite consensus disorder prediction 494 596 - -
Mibi02g2171 607 CDD STKc_TDY_MAPK 122 460 - -
Mibi02g2171 607 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 122 465 - -
Mibi02g2171 607 Pfam Protein kinase domain 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2171 607 MobiDBLite consensus disorder prediction 1 43 - -
Mibi02g2171 607 SMART serkin_6 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2171 607 FunFam Mitogen-activated protein kinase 112 216 - -
Mibi02g2171 607 ProSiteProfiles Protein kinase domain profile. 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2171 607 FunFam Mitogen-activated protein kinase 209 438 - -
Mibi02g2171 607 FunFam Mitogen-activated protein kinase 439 461 - -
Mibi02g2171 607 Gene3D Phosphorylase Kinase; domain 1 139 461 - -
Mibi02g2171 607 ProSitePatterns Protein kinases ATP-binding region signature. 129 153 IPR017441 GO:0005524
Mibi02g2171 607 Gene3D Transferase(Phosphotransferase) domain 1 209 438 - -
Mibi02g2171 607 MobiDBLite consensus disorder prediction 544 576 - -
Mibi02g2171 607 ProSitePatterns MAP kinase signature. 158 261 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mibi02g2171 607 MobiDBLite consensus disorder prediction 17 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2171 Mibi-ChrMibi02 24339944 24345391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2171 1 595 MAP Kinase Gene Family AT1G73670 69.983 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mibi02g2171 Pkinase 1.6e-68 CL0016