Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2167 ATGAGAAGGCCTTCCTCTGAGAAACGGTCTTGGTCCAAGGAAGAAGACCAGAAACTCATTGATTACGTTCAAAAACATGGTGAACGTTCCTGGCCTTCTCTCCCTCAGGCCGCAGGGTTGAGTAGGTGCGGGAAAAGCTGTAGGTTGAGATGGTTAAATTATCTGAAGCCGGACATTAAAAGAGGAGACTTTGGAGAAGACGAAGAGGACTTGATTATCAGGCTTCATGCTCTTCTTGGCAATCGGTGGTCACTAATAGCGGGAAGGTTACCAGGAAGAACGGATAACGAGGTGAAGAATTATTGGAACTCTCACATAAGAAAGAAGCTTATTCAGATGGGTCGTCATGATCCCAATAATAATAATAATAATAATAATAATAATCACAAGGTTGATGATCATGAAGTTTTCAATAATTCAGTCAATTACTTGCGTAATAATATTATCGACCAGGATGAAGAGGACGATCATCAGGTAGTTGACCAGTCAACAGGCAGCAAGTACAAGTTCAACCTCAACTCTTTTCCTGATTTAAATCTTGATCTCACACTCACTACTACTTATCACTCTAGTGACCATTAA 582 0.4072 MRRPSSEKRSWSKEEDQKLIDYVQKHGERSWPSLPQAAGLSRCGKSCRLRWLNYLKPDIKRGDFGEDEEDLIIRLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRKKLIQMGRHDPNNNNNNNNNNHKVDDHEVFNNSVNYLRNNIIDQDEEDDHQVVDQSTGSKYKFNLNSFPDLNLDLTLTTTYHSSDH 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2167 193 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Mibi02g2167 193 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 150 - -
Mibi02g2167 193 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Mibi02g2167 193 CDD SANT 10 55 IPR001005 -
Mibi02g2167 193 FunFam MYB transcription factor 62 124 - -
Mibi02g2167 193 CDD SANT 66 106 IPR001005 -
Mibi02g2167 193 Gene3D - 8 60 - -
Mibi02g2167 193 Gene3D - 63 138 - -
Mibi02g2167 193 SUPERFAMILY Homeodomain-like 7 102 IPR009057 -
Mibi02g2167 193 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Mibi02g2167 193 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Mibi02g2167 193 Pfam Myb-like DNA-binding domain 61 105 IPR001005 -
Mibi02g2167 193 SMART sant 7 57 IPR001005 -
Mibi02g2167 193 SMART sant 60 108 IPR001005 -
Mibi02g2167 193 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Mibi02g2167 193 FunFam MYB-related transcription factor 7 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2167 Mibi-ChrMibi02 24256266 24258405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2167 2 185 MYB Transcription Factor Family AT4G38620 44.860 6.79e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g2167 Myb_DNA-binding 1.3e-15 CL0123