Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2163 ATGTCCCCTCGTGCCGACGAATACCACGACGAAGATGACCTCTCCTCCAGCGAAGACGACGATGGCTTCAAGGAGGACATGGAAGCCCTAGGACGAGCCTGCAAGATCGCCGGAACCAATCCCGATGATCTCAAATCCACTCCCTCTGTCGCTCACGACGATGAGGAGGCAAACGCAGTCGTTTTGAAAGCACAGGACCCTCTTTTGGGCCCCGGCGATGCTCTTGTCTCCGTTTCAGACTCCGACGACGAACAGAGTGACCTCAAGTATCTTCAAAGAGTGCAGGAGCTTTACCCGATTTCGTCTCTCAAGCCGTTGAATTCTCTTCCGTCGCTTTCTTTGTCTGATGATGATGAAGATGATATGGAGCTCCTTCGAGCTATTACGAGACGATTTGCCTCTTATGAAAAAAGCTTTGATGAAGATAATGTGCATAAAATGGCTGAGGGAGCTTATACCTCAGGTCTAGGCTCTGAGGTGGAATTTGATAACAGGATGACATATGATGGATTAGATCCTGGTGAATCGTGCCCTGTTTCCCAGGATGCTGTTACCACCACCGGTTTATTGGCTGGTGATGTTGAGAGACACCCTTTTAACATCAACGAAAGGTGTAAGCCTGAAGCGTGCGAGCCATCCAAGCTACCGGACAAAAGATCAAATTTTCCTTTGTCTGCTCAGGTTTTGTTTGATGCAATAAAAAAGAATAGGTCTTTCCAGAAGTTACTTCGAAGTAAGTTGATTCAGATGGAAGCAAAAATTCAAGAAAACAGACAGTTAGCAGAAAGAGTTAAACTTCTTAAAGGCATTCAGGTTTCATGCATACGAAGAACAGGGCAAGCTATATCTCTGAAAAAGGATCCCCGTGTCCTATTAATATCTACAAGAAAGTCTCCTACTTCAAGTAATACGAAGATAAATGATAAAAAGGTATCTGCAATGTGTTATGGCCCAGCTGAGAATGCTCATGTTGCTAATTATAGGATGGTGTTGGAACGAACTCCATTCTCTTTGGATCGGAAAAAGTGGTCTAATGTGGAGAGGGAGAATCTTGTTAAGGGAATAAAGCAACAATTTCAAGAAAGGGTGCTTCAAATGTCATTAAATCAGGACAGTTCAGAGTGGTCATATGGATATGCAAATAACTTTGATACCATCCTTGCATCAATTAAAGATCTTGAGATTATGCCTGAGAACATTAGAAAGTTTGCGATTGAGTTCAATTGGGATCAGCTGGCTTCCAAGTATGTTGTTGGTCGTACTGGTGCAGAATGTGAAGCAAGTTTTTTTACTATCATTTCATGTTTATGTCCTTTTTGTGAAGAAATTTCTCCTCAAGCATTGCAGGCATCTATGTTGATGATGATACCATCACAGACTGTTTGTCACTTTTGGGTTTCGATTAGAGTGCAAGATCAGCGTAGATCATGCAGGTGGTTAAATTGTGAAGATCCCTTGATCAATCATAGCCCATGGACCTGTGAGGAGGACAAAATGCTGTCGAACATAATCCAAGAGATTGGCAATAGGAATTGGCTTAAAATTGCTGCATCGCTCAGCACAGATAGGACCCCATTTCAATGCTTGGCACGATACCAAAGGAGTCTAAATCCCTCCATGCTAAATAGTGAATGGACAGAAGAAGAAGATGCTCAACTTCGCCTTGCTGTTGTGAATTTTGGTGTGAGCAATTGGCAGTCTGTAGCTTCTGTATTAGAACGAAGGACTGGAACTCAATGCTCTAATAGATGGAAGAAGTCCCTCTGTCCTGATAGGAAAGGGAGCTTTACTGTGGAAGAAGATGAGCACTTAACAGTGGCTGTCCATCTCTTTGGACGGAAATGGAATCAGATAGCTAAATTCGTCCCTGGCCGGACCCAAGCTCAGTGTAGAGACAGATATGTTAATAGTTTGGATCCCTCTTTGAAATGGGGTGGATGGACTGAGGAAGAAGATTCGAGATTGAAAGAAGCAATTACCAAACATGGATTCTGCTGGTCAAAGGTTGCTGCAGATGTGCCTCCACGAACTGACAGTCAATGCAGGAAGAGATGGCGGGTTCTATTTCCTGACCAAGTTCCTATGCTTCAAGCAGCAAGAAAGATGCAAAAATCTGCCCTGATCTGTAATTTTGTTGATCGAGAGTCTGAACGACCTTGCCTTTCCCTAAATGACTTTCTTCCATTGGCAATGTTAGATCCACCCTCCGATCCAGATGCCGTGAATCTTCCTCAGAAGAGGAAGAGTCGCTCAAGCAATACTTCCAAGAAAAAGAGGCCCCAAAAACGCACAAAAAAGGCTCAAAGTTGTCTCAAGAAAGCACAGGCTGACGAGGTTGAGCCTTGTAGTGGACATGGTGTCCACAAACCAAAGATTACTGAACCACATCTGGAGGACAGCTCTGTTGAAGTTCTGCATGATCATTTGCCACTGGACTTGGTTGTGTCGACAAGGAATAGCCAAGGGGATTTTGGTGGACTTGATAATATTGACGAGCTAATTGAGTCAAATCAAATGCGGAATGGTTTTAATGAATTACATGGAGAGAGCCATACTTGTATTGCACCTTCTGAGAATCCAGAAGCAGGGACAACAGGTGGGCATTTTGAGAAAATCTCTTCTATGGACTCATTGAACCTAACTGGAAGAAAGTCTACGCAATCTGCAAGTATTTCTGATGGTACAGCTGTAGGCAGCAAGCTTGCCAGAAATGCTATTTCAAATAAGGGAAGAAAAAAGAAAGGGAATCACAATAGAATGGTTAGAAGTGTTCAAACAGCAGAGGACCACCTGATTAACAATAAAATGCCAAAACCTAAAGGCCTATCTTCTGTGCAGATTTTAGAAAATCATTCTTGCAATTTGGAGAACATGTCAACCATTGAAGCTGATGACAATGGGAAGGCAATGTTAGGGCCAGTCGATGAGCAGACTATGTTTTTGGATGGTGTGACAGAACCCAAAAACATCAATGTTGAAGATGATGTGTCTAATGACGTCACCCTTGCTTCCTTCCTGAAAAAGAAGAAAAGCAAGGGCAAGGCAATGGATGAGCCAGTTGATGAGCAGGCTATGGTTTCAAATGGTTCGACAGAAACCAAAGGCATGAGTGTGGGAGATAATGCATCTCTTGACGTTACTCTTGCTTCCTTGCTGAAAAAGAAAGGAAGGAGGCAGGGTAGAGCAGCTAGATGTAGCTAG 3201 0.4333 MSPRADEYHDEDDLSSSEDDDGFKEDMEALGRACKIAGTNPDDLKSTPSVAHDDEEANAVVLKAQDPLLGPGDALVSVSDSDDEQSDLKYLQRVQELYPISSLKPLNSLPSLSLSDDDEDDMELLRAITRRFASYEKSFDEDNVHKMAEGAYTSGLGSEVEFDNRMTYDGLDPGESCPVSQDAVTTTGLLAGDVERHPFNINERCKPEACEPSKLPDKRSNFPLSAQVLFDAIKKNRSFQKLLRSKLIQMEAKIQENRQLAERVKLLKGIQVSCIRRTGQAISLKKDPRVLLISTRKSPTSSNTKINDKKVSAMCYGPAENAHVANYRMVLERTPFSLDRKKWSNVERENLVKGIKQQFQERVLQMSLNQDSSEWSYGYANNFDTILASIKDLEIMPENIRKFAIEFNWDQLASKYVVGRTGAECEASFFTIISCLCPFCEEISPQALQASMLMMIPSQTVCHFWVSIRVQDQRRSCRWLNCEDPLINHSPWTCEEDKMLSNIIQEIGNRNWLKIAASLSTDRTPFQCLARYQRSLNPSMLNSEWTEEEDAQLRLAVVNFGVSNWQSVASVLERRTGTQCSNRWKKSLCPDRKGSFTVEEDEHLTVAVHLFGRKWNQIAKFVPGRTQAQCRDRYVNSLDPSLKWGGWTEEEDSRLKEAITKHGFCWSKVAADVPPRTDSQCRKRWRVLFPDQVPMLQAARKMQKSALICNFVDRESERPCLSLNDFLPLAMLDPPSDPDAVNLPQKRKSRSSNTSKKKRPQKRTKKAQSCLKKAQADEVEPCSGHGVHKPKITEPHLEDSSVEVLHDHLPLDLVVSTRNSQGDFGGLDNIDELIESNQMRNGFNELHGESHTCIAPSENPEAGTTGGHFEKISSMDSLNLTGRKSTQSASISDGTAVGSKLARNAISNKGRKKKGNHNRMVRSVQTAEDHLINNKMPKPKGLSSVQILENHSCNLENMSTIEADDNGKAMLGPVDEQTMFLDGVTEPKNINVEDDVSNDVTLASFLKKKKSKGKAMDEPVDEQAMVSNGSTETKGMSVGDNASLDVTLASLLKKKGRRQGRAARCS 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2163 1066 Gene3D - 643 691 - -
Mibi02g2163 1066 Gene3D - 591 642 - -
Mibi02g2163 1066 Gene3D - 543 590 - -
Mibi02g2163 1066 Gene3D - 490 540 - -
Mibi02g2163 1066 CDD SANT 595 638 IPR001005 -
Mibi02g2163 1066 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 537 592 IPR017930 -
Mibi02g2163 1066 ProSiteProfiles Myb-like domain profile. 639 689 IPR001005 -
Mibi02g2163 1066 SUPERFAMILY Homeodomain-like 540 634 IPR009057 -
Mibi02g2163 1066 ProSiteProfiles Myb-like domain profile. 537 588 IPR001005 -
Mibi02g2163 1066 MobiDBLite consensus disorder prediction 1011 1039 - -
Mibi02g2163 1066 ProSiteProfiles Myb-like domain profile. 592 638 IPR001005 -
Mibi02g2163 1066 CDD SANT 544 588 IPR001005 -
Mibi02g2163 1066 SMART sant 339 435 IPR001005 -
Mibi02g2163 1066 SMART sant 643 691 IPR001005 -
Mibi02g2163 1066 SMART sant 592 640 IPR001005 -
Mibi02g2163 1066 SMART sant 488 538 IPR001005 -
Mibi02g2163 1066 SMART sant 541 590 IPR001005 -
Mibi02g2163 1066 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 478 1032 - -
Mibi02g2163 1066 MobiDBLite consensus disorder prediction 736 792 - -
Mibi02g2163 1066 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 593 633 IPR017930 -
Mibi02g2163 1066 MobiDBLite consensus disorder prediction 1024 1039 - -
Mibi02g2163 1066 MobiDBLite consensus disorder prediction 1 28 - -
Mibi02g2163 1066 CDD SANT 647 689 IPR001005 -
Mibi02g2163 1066 MobiDBLite consensus disorder prediction 770 792 - -
Mibi02g2163 1066 MobiDBLite consensus disorder prediction 750 769 - -
Mibi02g2163 1066 CDD SANT 491 536 IPR001005 -
Mibi02g2163 1066 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 484 536 IPR017930 -
Mibi02g2163 1066 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 639 693 IPR017930 -
Mibi02g2163 1066 SUPERFAMILY Homeodomain-like 478 533 IPR009057 -
Mibi02g2163 1066 Pfam Myb-like DNA-binding domain 492 553 - -
Mibi02g2163 1066 Pfam Myb-like DNA-binding domain 596 655 - -
Mibi02g2163 1066 ProSiteProfiles Myb-like domain profile. 484 536 IPR001005 -
Mibi02g2163 1066 SUPERFAMILY Homeodomain-like 618 692 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2163 Mibi-ChrMibi02 24149880 24158103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2163 215 770 MYB-Related Transcription Factor Family AT3G18100 46.820 2.24e-160 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g2163 Myb_DNA-bind_6 3.1e-13 CL0123