Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2141 ATGAGCGAAAGCCCGCAGTCTCAGTCTGCCAGTGGAAATGGAAGTGTAAATGTCGAGCCTCACGACCCAAAATCAAACCCTAATCTCAAGCGCGAGGCTTCTTCAGAAGCTAATGATCTGACATCAAAGAAATCAAGAATTGATGCTTCGACTGTGCCTGATGCTTCCGGTAGTGAAGAAGAAGGGAGCTTAGGAGCCGTTTCAGGTCAAGAGAATGCAAAGGAACTAACTTTCGAGATTGAGGCAGACGCAGCTGAGGATAAGGGGTCTAGGCATACAATGGAAGACACATGGGTTGTGCTTTTGGATGCTAGTTTAGATCACCCTGGAAAACTGAGATGTGCACACTTTGCAATATATGATGGACATGGAGGCCGGTTAGCTGCTGAATATGCTCAAAAGCATTTGCATGAAAATGTTCTTTCAACAGGATTACCACGTGAGTTGTTAGATGTAAAGGTAGCTAAAAGAGCAATACTCGAAGGTTTTCGCAAAACCGATGAGTCCCTTCTTCAAGAAAGTGCTGCAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTTTGGGTATTGGGACAAAAAGTTTTTGTTGCAAATATTGGAGATGCCAAAGCAGTTGTAGCTCGGTCAGCTATAACTGATGGATCCCAAAATCACTCAGATGGGGTCCATGCATTGAAGGCCATTGTTTTGACGAGGGAACACAAGGCCATTTACCCACAGGAGCGGACTCGTATTCAGAAGGCTGGTGGTGTTGTGAGCTCCAATGGACGACTGCAAGGGCGTCTAGAAGTTTCTAGGGCATTTGGTGATCGCCAGTTCAAGAAGGTGGGTGTTATTGCAACCCCAGATATCCATTCTTTTGACCTTACTGATAGAGAGCATTTTATCATCCTTGGGTGTGATGGCCTATGGGGGGTATTTGGTCCCAGCGATGCAGTTGATTTTGTTCAGAAACTATTGAGGGAGGGGTTGCCTGTCCCAACCGTGACCCGCCATCTTGTAAGAGAAGCAGTTCGTGAGCGGCGCTGTAAGGATAATTGCACTGCAATTGTGATTGTATTCAAGCGTAACTAG 1077 0.4643 MSESPQSQSASGNGSVNVEPHDPKSNPNLKREASSEANDLTSKKSRIDASTVPDASGSEEEGSLGAVSGQENAKELTFEIEADAAEDKGSRHTMEDTWVVLLDASLDHPGKLRCAHFAIYDGHGGRLAAEYAQKHLHENVLSTGLPRELLDVKVAKRAILEGFRKTDESLLQESAAGGWQDGATAVCVWVLGQKVFVANIGDAKAVVARSAITDGSQNHSDGVHALKAIVLTREHKAIYPQERTRIQKAGGVVSSNGRLQGRLEVSRAFGDRQFKKVGVIATPDIHSFDLTDREHFIILGCDGLWGVFGPSDAVDFVQKLLREGLPVPTVTRHLVREAVRERRCKDNCTAIVIVFKRN 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2141 358 SMART PP2C_4 71 353 IPR001932 -
Mibi02g2141 358 PANTHER PROTEIN PHOSPHATASE 2C 43 353 IPR015655 GO:0004722|GO:0006470
Mibi02g2141 358 Pfam Protein phosphatase 2C 85 343 IPR001932 -
Mibi02g2141 358 MobiDBLite consensus disorder prediction 1 71 - -
Mibi02g2141 358 SUPERFAMILY PP2C-like 80 356 IPR036457 -
Mibi02g2141 358 FunFam Probable protein phosphatase 2C 67 69 357 - -
Mibi02g2141 358 Gene3D - 66 357 IPR036457 -
Mibi02g2141 358 MobiDBLite consensus disorder prediction 1 22 - -
Mibi02g2141 358 CDD PP2Cc 85 355 IPR001932 -
Mibi02g2141 358 ProSiteProfiles PPM-type phosphatase domain profile. 81 355 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2141 Mibi-ChrMibi02 23900459 23906202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2141 78 307 PP2C-type Phosphatase Gene Family AT1G18030 80.870 1.02e-138 394