Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2125 ATGCCTGTTGTTTCAGATGCTTCTTCAGAACGCATGAAATGTACTAGTAGAAGACCAAGAACCCATTTTGGCAACCTCATTCAACAACCAGATCCAAACCCTCAAATCCCTTCAATAATCGAGTTCACTCGCTGCAAATCAACCATCTCCTCCCTCCTTCTCTCCACTTTCTCCAACAACAACACAGCCAATGAGATTAGCAACAACATGAACATCGCCGGCGCTGGCCGTAACAACAAGAAGAAGAACAATTTCTCCTCGGCGGCGGCGACCTTCAGGGGTCTCGGATGCACCGCCGGCGCGTCGGAGCAAGTTTCAGTTCCGGCGGTGATCCGTACGTCGGCTGATTGGCAAGGGAAGAAGGCGAGGAAGAAGAAGAAGAATAAGAGGAATAGTACAAGAACATGCAATGGGGTTGTTATTGATGGCTCTGGTTCTGGTTCTGGTTCTTCTAATAATTGTGTTGATTTTCAAGATGTTTGGTGTGGTCCTGGAATTGGGTTTTCTGCAGATGCTGCTGCTTCTGTAGATTGTGTTGTGGCCAGGAAGAATGTTTCTTCTAGAGGCAAGATTGATGTGGAGAGGATGACTCATAGAGAGCGAGTTTCCTATCTCGGAAGAAGAACAGTTAACCCAGAAACCATTTCGTTTCTGGATAATGATCCTGATATCTTCCCAACTCGCCCTCCTGCTCCTGATCCCTATGCAACTTCAAGATACTATCGCCATGTTCGACATCCTTCATCTGAAGGTTTCGCTGAGATAATGATGCTTCAAGGAGGTCTGCTAATGGGAGGAATATTAGATTCACATGACCAATTTAGAGACTGGAGACTTGATGTTGATAATATGTCATATGAGCAACTGCTTGAGCTTGAAGAGAAGATTGGTTACGTGAGCACGGGTCTTAAAGAAGACGAGATCGGATGCCACATAAGGAAAATTCGATATCCATTTTTTAGCGAAGCATTGAAACACCATATTAACAAAAAGTGCAGCATTTGTCAGGAAGAATATGAAGGAGATGATGAGGTGGGGAAGCTAAACTGTGAACACAACTATCACTTTGAGTGCATCAGACAATGGCTTGCACAGAAAAACTTCTGTCCTGTCTGTAAGCAAGAAGTTGTGGTTCGTCACTAG 1143 0.4471 MPVVSDASSERMKCTSRRPRTHFGNLIQQPDPNPQIPSIIEFTRCKSTISSLLLSTFSNNNTANEISNNMNIAGAGRNNKKKNNFSSAAATFRGLGCTAGASEQVSVPAVIRTSADWQGKKARKKKKNKRNSTRTCNGVVIDGSGSGSGSSNNCVDFQDVWCGPGIGFSADAAASVDCVVARKNVSSRGKIDVERMTHRERVSYLGRRTVNPETISFLDNDPDIFPTRPPAPDPYATSRYYRHVRHPSSEGFAEIMMLQGGLLMGGILDSHDQFRDWRLDVDNMSYEQLLELEEKIGYVSTGLKEDEIGCHIRKIRYPFFSEALKHHINKKCSICQEEYEGDDEVGKLNCEHNYHFECIRQWLAQKNFCPVCKQEVVVRH 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2125 380 SUPERFAMILY RING/U-box 331 378 - -
Mibi02g2125 380 FunFam E3 ubiquitin-protein ligase rnf12-A 299 378 - -
Mibi02g2125 380 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 330 378 IPR013083 -
Mibi02g2125 380 ProSiteProfiles Zinc finger RING-type profile. 332 373 IPR001841 -
Mibi02g2125 380 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 69 376 IPR045191 GO:0061630
Mibi02g2125 380 Pfam Ring finger domain 331 373 IPR001841 -
Mibi02g2125 380 SMART ring_2 332 372 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2125 Mibi-ChrMibi02 23511259 23515494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2125 80 287 C3H Transcription Factor Family AT1G73760 45.740 3.98e-50 168