Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2114 ATGTTTAACCAACCAAGCCAGGATGGTGTGATAACAATGGAGGCCTATATGCTCCTCCTCCTCATAATCTTCTCCTTCTCCTTCTTCCTTTCCTATTTCCCACTTTCCCTCTCCCAGCCAGACAAGGAATACAGGGAGTGCAGACCATCACCATGTGGAAAAGTAGGACAAATCCAATACCCTTTCTGGTCTGAAGAAAGTAATCGACCTCGTTATTGTGGTAGATCTTCTGAGTTCAAGCTCAAGTGTCCCCAAGATGGAAATCACTACCCTTCCATTGAAATCGATTCACAGACTTTCATTGTCACATACATTGACCAATCAGCTCCCAAGATGACACTGTTGCCAACAGACTTTGTGTATAACAACTGCTCTTCACATCGCACCAACAATTCTGTGAGCATCCGGCCCAATATCTTCCATTATGATGAGCCATATGTGAAGAACGTAACCCTGTTCTACGACTGCCCCGAAGGCATAGACTATTTGATTGAGGGATTCCAATTCAAATGCCTGCCACGGACAGGATCTAACCCTTATTCTATAAACTATGCTTTTTATTCGGAAGATATCGCCAATGATACGCGTTTCCCCTACCGTGGTATTAAGGATTGTAAGAACCGTATTGAGGTGCTGGTTTCAAACGAAACTTATGTGAATCCTCAATATCAACCCCTAATCATTGAAGAAGCTTTGGGGAGAGGGTTTGGTGTGGTGTATGAATTTGATGAGTCTTGTAAGAAATGCTGGGATTCTGAAGGAAGATGTGGGTCTAATGATACGTCTCCGTTTGTCTGCTATTGCCTTGATGGACATCATCCTTTCAACTGTTCTTATACTTTCCATTCTTCCGATTCTTCCGGGGGACTTTCAAGTAAAGAAAAAAAAGTCATTGTAGGTGCTGTTACTGGTACAGTCGTTGCGCTTGTCATGCTTACTCTCTTCTTTCTCTATCAACGACGAAAGAAGACCGGTTATGCAAAATCATACATACAATCACATACTGCTTCCTCTGTTTCCTCCAAGTTGGCAGACTCTGATATTAATGCAAGTAAATATTTTGGAGTACCCTTGTTCACATACACCGAACTTGAAGAAGCCACTAACAATTTCCATGAAGCCAGAGAACTTGGAGATGGAGGTTTTGGAACAGTCTACTTTGGTAAACTTAAGGATGGTCGTCAAGTTGCAGTGAAGCGACTGTACGAAAGCAATTACAAGAGAGTAGAACAATTTATCAACGAAGTTCAGATCCTGACACGCTTGCGTCATGTAAACCTTGTGTCCCTCTATGGCTGCACTTCTCGGCACAGCCGCGAACTCCTCCTTGTATATGAGTACATTCCCAATGGAACGGTCGCAGATCATCTTCATGGCGATAGAGCGAAGCCTGGCTCATTGCCTTGGAATATAAGAATGAATATAGCCATTGAAACTGCAAGTGCTCTAGCATACCTTCATGCCTCAGACATCATCCATAGAGATGTCAAAACCAACAACATCCTTCTGGACAACCATTTTGTTGTTAAAGTTGCAGACTTCGGACTGTCCCGTCTCTTCCCGGATCATGTCACTCACGTTTCCACAGCCCCCCAAGGAACTCCGGGCTACGTTGACCCTGAGTACCATGAATGCTATAAGCTAACTGATAAAAGTGATGTTTATAGCTTTGGTGTGGTGCTGATTGAGCTCATATCTTCGTTGCCAGCTGTGGACATCACGAGACATCGACATGAGATCAATCTGTCCACCATGGCGATCAACAAAATTCATAACCAGGCATTGCATGAGCTGGTGGATCCTACACTTGGGTTTGAGTCTGATCCGAAGGTGAGGAAGATGATTAATGCGGTGGCTGAGCTGGCATTTCAGTGTTTGCAGAATTTGAAGGATATGAGGCCTTCCATGGAGGAAGTGGTGGAGACGCTGAGGGAAATAGAGAGTGATGGGAGGCATAAGAGCGAGCCGGAGGTGATGGATATTTCTGCAGAAGATGATGTTGGGTTGCTCAAGAATGATATACCTCCACCTTCCCCTGATTCTAATTTAGCAAGCAAGTCTACAACTTCAAATTCTAGCAGTTGA 2085 0.4403 MFNQPSQDGVITMEAYMLLLLIIFSFSFFLSYFPLSLSQPDKEYRECRPSPCGKVGQIQYPFWSEESNRPRYCGRSSEFKLKCPQDGNHYPSIEIDSQTFIVTYIDQSAPKMTLLPTDFVYNNCSSHRTNNSVSIRPNIFHYDEPYVKNVTLFYDCPEGIDYLIEGFQFKCLPRTGSNPYSINYAFYSEDIANDTRFPYRGIKDCKNRIEVLVSNETYVNPQYQPLIIEEALGRGFGVVYEFDESCKKCWDSEGRCGSNDTSPFVCYCLDGHHPFNCSYTFHSSDSSGGLSSKEKKVIVGAVTGTVVALVMLTLFFLYQRRKKTGYAKSYIQSHTASSVSSKLADSDINASKYFGVPLFTYTELEEATNNFHEARELGDGGFGTVYFGKLKDGRQVAVKRLYESNYKRVEQFINEVQILTRLRHVNLVSLYGCTSRHSRELLLVYEYIPNGTVADHLHGDRAKPGSLPWNIRMNIAIETASALAYLHASDIIHRDVKTNNILLDNHFVVKVADFGLSRLFPDHVTHVSTAPQGTPGYVDPEYHECYKLTDKSDVYSFGVVLIELISSLPAVDITRHRHEINLSTMAINKIHNQALHELVDPTLGFESDPKVRKMINAVAELAFQCLQNLKDMRPSMEEVVETLREIESDGRHKSEPEVMDISAEDDVGLLKNDIPPPSPDSNLASKSTTSNSSS 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2114 694 MobiDBLite consensus disorder prediction 645 694 - -
Mibi02g2114 694 MobiDBLite consensus disorder prediction 678 694 - -
Mibi02g2114 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Mibi02g2114 694 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 343 447 - -
Mibi02g2114 694 Gene3D Phosphorylase Kinase; domain 1 343 447 - -
Mibi02g2114 694 SMART serkin_6 371 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2114 694 SUPERFAMILY Protein kinase-like (PK-like) 349 643 IPR011009 -
Mibi02g2114 694 Pfam Mid2 like cell wall stress sensor 283 326 IPR007567 -
Mibi02g2114 694 FunFam Wall-associated receptor kinase-like 20 448 656 - -
Mibi02g2114 694 Pfam Wall-associated receptor kinase C-terminal 191 270 IPR032872 -
Mibi02g2114 694 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Mibi02g2114 694 Gene3D Transferase(Phosphotransferase) domain 1 448 658 - -
Mibi02g2114 694 MobiDBLite consensus disorder prediction 645 667 - -
Mibi02g2114 694 ProSiteProfiles Protein kinase domain profile. 371 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2114 694 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 22 692 IPR044652 GO:0004672
Mibi02g2114 694 Pfam Protein kinase domain 371 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2114 Mibi-ChrMibi02 23342726 23350676 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2114 47 694 Receptor kinase-like Gene Family AT1G25390 43.910 2.25e-155 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi02g2114 Pkinase 4.4e-49 CL0016